MEC: Contig Misassembly Correction
...shows that MEC can reduce misassemblies effectively and result in quantitative improvements in scaffolding quality. MEC is publicly available for download at https://github.com/bioinfo...1546 days ago
1538 days ago
Juicebox: Visualization and analysis software for Hi-C data
...s visualization software for Hi-C data. This distribution includes the source code for Juicebox, Juicer Tools, and Assembly Tools. Download Juicebox here, or use Ju...1530 days ago
1454 days ago
SynVisio: An Interactive Multiscale Synteny Visualization Tool for McScanX.
...can configure the type of plots required and then choose the source and the target chromosomes that need to be mapped. Users also have option to download the generated visualizations...1430 days ago
1412 days ago
SEASTAR: Systematic Evaluation of Alternative STArt site in RNA
.... version 1.0.0 - updates several descriptions and tests. To achieve v0.9.4, one can visit https://github.com/zhyqin/SEASTAR-0.9.4 for download.1356 days ago
chromatiblock: Scalable, whole-genome visualisation of structural changes in prokaryotes
...conda Then in future to run chromatiblock you can reactivate this environemtn using conda activate chromatiblock Direct download: Alternatively you can download and run the script from ...1345 days ago
1202 days ago
957 days ago