Results for "EMBL"
Users
About me: I am a bioinformatician, working as a SRF fellow. Working on Shotgun Assembly database.1145 days ago
- About me: ...g technologies like shotgun sequencing, linked reads, and long-read sequencing for whole-genome resequencing, variant calling, and transcriptome assembly, and differential expression...
1138 days ago
Blogs
List of gene ontology software and tools
...he remaining terms can be visualized in semantic similarity-based scatterplots, interactive graphs, or tag clouds. http://revigo.irb.hr/ QuickGo (EMBL-EBI Institute) It uses exten...3708 days ago
Structural variation: the hidden genomic treasure
...ral variants (copy-number variants) with tiling microarrays Link R Package https://www.bioconductor.org/help/course-materials/2010/EMBL2010/Practical-4-StructuralVar...2701 days ago
- +3 more Blogs
Bookmarks
- ...ence between genomes and to explore conservation of synteny, in the context of the entire sequences and their annotation. It can read complete EMBL, GENBANK and GFF entries...
2796 days ago
iTOL: interactive Tree Of Life
Interactive Tree Of Life is an online tool for the display and manipulation of phylogenetic trees. It provides most of the features available in other tree viewer...2650 days ago
- +8 more Bookmarks
Files
- 1000 Genomes data tutorial at ASHG Structural variants presentation by Jan Korbel European Molecular Biology Laboratory (EMBL) Heidelberg Genome Biology Research Unit Reference: https://www.genome.gov/pages/research/der/1000genomesprojecttutorials/structuralvariants-jankorbel.pdf
2796 days ago
Pages
Bio++ : C Language libraries for your biological need
...ures that would otherwise require the use of Assembly Language. As Dennis Ritchie...tation language efficient enough to displace assembly language, yet sufficiently a...ing you to fetch public databases like GenBank, EMBL or SwissProt,Algorithms for p...3946 days ago
Introduction to Bioinformatics
Bioinformatics (Genomics) Biocomputing in a Nutshell. Biologist's Guide to Internet Resources Computational Molecular Biology Course Course on Bioinformatics EM...3920 days ago
Top-level pages
- ...stored in public databanks (such as Genbank or EMBL for primary DNA sequences). T...rld wide web. Protein sequence databanks like trEMBL provide the most likely trans...protein sequence database and its supplement TrEMBL in 2000. Nucleic Acids Res. 2...
3946 days ago
- ...eveloped by the NCBI for submitting and updating entries to the GenBank, EMBL, or DDBJ sequence databases....consists of a series of tools for DNA sequence preparation (pregap4), assembly (gap4), editing (gap4) and D...
3941 days ago
- +7 more Top-level pages
Wire posts
News
Chromatin: From nucleosomes to chromosomes, 30 April - 2 May 2014
EMBL-EBI announced the Wellcome Trust Scientific Conference Chromatin: From nucleosomes to chromosomes, which continues EMBL-EBI series of meetings focuse...3924 days ago
Opportunity posts
EMBL Postdoc position in Bacterial Gene Gain Loss
...BI) and John Welch (Genetics Department, Cambridge University) under the EMBL-EBI / Cambridge Computational...www.ebi.ac.uk/research/postdocs/ebpods/projects/goldman-welch-2015 . The EMBL-EBI / Cambridge Computational...3179 days ago
ResearchLabs posts
- Location :European Molecular Biology Laboratory (EMBL), Heidelberg, Germany. Our long-term research objective is to understand microtubule organization in living cells, with an em...
3947 days ago
- ...f cell cycle and of cell migration of individual cells under normal conditions and many different perturbations (RNAi, drugs). More @ http://www.embl.de/research/units/genome_biol...
3889 days ago
Video
Critical to discoveries in bioinformatics
EMBL-EBI distributes datasets worldwide using the Janet network. This biological data enables the discovery of new drugs, new diagnostics and increasingly new agro-che...3791 days ago
Bio-Scripts
BioPerl to convert between sequence formats from Fasta to Genbank
#!/usr/local/bin/perl -w # Sequence formats to choose: Fasta, EMBL. GenBank, Swissprot, PIR and GCG use Bio::SeqIO; $inFile = "BRCA2.fa"; $in = Bio::SeqIO->newFh('-file'...2914 days ago
Downloading mmseqs databases !
...minoacid yes https://www.uniprot.org/help/uniprotkb - UniProtKB/TrEMBL Aminoacid yes https...b-is-released - eggNOG Profile - http://eggnog5.embl.de - dbCAN2 Pr...941 days ago
Tags
Find predicted CRISPR sites using Ensembl
Did you know that you can now use Ensembl to help design your CRISPR experiments? Just turn on the brand new track that shows you the CRISPR sites that have been predicted by the WGE group (http://www.sanger.ac.uk/science/tools/wge) Find out more on our blog:http://www.ensembl.info/…/fi...Tags: Bioinformatics, EMBL, CRISPR
2838 days ago
Comments
Comment on "Coronavirus Resources !"
Raw and assembled sequences related to the COVID-19 outbreak, including outbreak isolates and records relating to coronavirus biology. Includes extensive sampling information. https://www.covid19dataportal.org/sequences?db=embl1422 days ago
- AfterQC AfterQC - Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data. dupRadar dupRadar. An R package which provid...
2136 days ago
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