Results for "Extending"
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PERGA - Paired End Reads Guided Assembler PERGA is a novel sequence reads guided de novo assembly approach which adopts greedy-like prediction strategy for assembling...2174 days ago
Many-to-many pairwise alignments of two sequence sets
...score where the score of an alignment is equal to the sum of the matches taken from the scoring matrix, minus penalties arising from opening and extending gaps in the aligned sequences...2161 days ago
Bokeh: An interactive visualization library that targets modern web browsers for presentation
..., check out the Gallery. A complete API reference of Bokeh is at Reference Guide. If you are interested in contributing to Bokeh, or extending the library, see the Dev...2108 days ago
CoLoRMap: Correcting Long Reads by Mapping short reads
...ideas: using a classical shortest path algorithm to find a sequence of overlapping short reads that minimizes the edit score to a long read and extending corrected regions by local as...2098 days ago
regioneR: an R package for the management and comparison of genomic regions
Regioner is an R package for the management and comparison of genomic regions. It offers a set of function for basic manipulation of region sets extending the functionality of GenomicR...1985 days ago
EGAD: Ultra-fast functional analysis of gene networks
With the EGAD (Extending ‘Guilt-by-Association’ by Degree) package, we present a series of highly efficient tools to calculate functional properties in networks base...1983 days ago
Tadpole: an assembler, error-corrector, and read-extender
Tadpole is a kmer-based assembler, with additional capabilities of error-correcting and extending reads. It does not do any complicated graph analysis or scaffolding, and therefore, is...1565 days ago
ContigExtender: a new approach to improving de novo sequence assembly for viral metagenomics data
...ive Overlap Layout Candidates (r-OLC) strategy that explores multiple extending paths to achieve longer and highly accurate contigs. ContigExtender is effective for extending contigs significantly in in s...11 days ago
