Bio++ : C Language libraries for your biological need
...evolution Data structure and IO Phylogenetic trees.IO from newick files, with support for multiple e...stuction methods Parsimony (NNI)Distance matrices estimation and I/O to files in Phylip format.Distance me...3964 days ago
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Linux SSH Client Commands for Bioinformatics
...g variable 'VerboseMode' to 'FALSE'. debug: SshConfig/sshconfig.c:3130/ssh_config_read_file_ext: Read 17 params from config file.  ...3722 days ago
Find certain files/documents in Linux OS
...d lost in the huge numbers of files and folders. In order to search the missing file a strong search command is re...-name Gene/Gene5. Find fasta Files Using NameFind all php files...;18. Find and remove Multiple FileTo find and remove multiple fi...3697 days ago
Linux Sort Commands for Bioinformatics
...come to space efficiency GNU sort stands at the top. It can sort a 20Gb file with less than 2Gb memory. It...ial to implement so powerful a sort by yourself. sort a space-delimited file based on its first column, th...3643 days ago
A guide for complete R beginners :- Getting data into R
...y however you want to input from a file. We have touched on the &lsqu...on assumes certain things from the file The file is a plain text f...ll tell you. If you know that the file has uneven columns mydata...or to save as a pdf pdf(‘filename’) boxplot(A, B, n...3373 days ago
A guide for complete R beginners :- Installing R packages
...e /data/Rpackages/ all the time. To avoid this burden, we create a file .Renviron in our home area, a...oid having to specify this at every package install, simply: create a file .Rprofile in your home area....3373 days ago
Genome Assembly Tools and Software - PART2 !!
...e assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short...igned sequence reads in a SAM file and a set of variant calls in...e, and all your sequence read files. The genome size can be supp...2702 days ago
Awesome perl frameworks, libraries and software - PART 2
...l module to read Excel binary files Geo-omics/scripts - Ge...which allows you to tail log files over FTP jjl/Spark-Form&nbs...nversion of Garmin FIT binary files mbarbon/extutils-xspp ...project to generate .DS_Store files (even on non-MacOSX), based...2510 days ago