Results for "Framework"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...ppl. 12):S4, 2010 Full Text The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation...ata. McKenna et al, Genome Res 20(9):1297-303, 2010. PubMedCentral A framework for variation discovery and g...3772 days ago
List of bioinformatics open source projects/software.
...s toolkit built using the Microsoft 4.0 .NET Framework to help developers, researche....org/anduril/site/ Component-based workflow framework for data analysis Armadillo...ng, etc. Gaggle https://www.gaggle.net/ A framework for interoperability between...3750 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...ools/resource with brief description and homepage ALF A Simulation Framework for Genome Evolution http://w...history traits, and phenotypic traits in a flexible (meta-)population framework. http://nemo2.sourceforge.net...3730 days ago
Commercial and public next-gen-seq (NGS) software
...papers/lmi/epigenomes/sissrs/ See also this thread for ChIP-Seq, until I get time to update this list. Alternate Base Calling Rolexa - R-based framework for base calling of Solexa da...3512 days ago
Software packages for next gen sequence analysis
...t. Raja Jothi @ NIH. Perl. **See also this thread for ChIP-Seq, until I get time to update this list. Alternate Base Calling * Rolexa - R-based framework for base calling of Solexa da...3235 days ago
Comprehensive list of visualization tools for biological pathways
...s over the web http://www.biotapestry.org/ Caleydo Visual analysis framework targeted at biomolecular data...visual editor, built around an extensive ontology and an integration framework http://www.cs.bilkent.edu.tr...2280 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...g Output: pair of VCF files Triodenovo Description: Bayesian framework for calling de novo mutations...r joint analysis using priori information; Provides linear regression framework, Pathway Association Analysis...2902 days ago
Genome Assembly Tools and Software - PART1 !!
...Age, CO-alignment, and Paired-end Read LinkAge COCACOLA: a general framework for binning contigs in metage...Variation Analysis Cortex is an efficient and low-memory software framework for analysis of genomes using...2679 days ago
Awesome perl frameworks, libraries and software - PART 1
...curated list of awesome Perl frameworks and libraries. Come on Pull...l multitasking and networking framework for any event loop. kraih/ma...lt in Perl using the Catalyst framework. nassosoassos/sail_align&nbs...p;- Raisin - a REST API micro framework for Perl joshua-hull/R...2482 days ago
Single Cell RNAseq data analysis tutorial !!
...s a probabilistic model to analyze single-cell expression data during differentiation https://github.com/hmatsu1226/SCOUP scLVM is a modelling framework for single-cell RNA-seq data...2344 days ago
