MALVA: Genotyping by Mapping-free ALlele Detection of Known VAriants
...e multi-allelic SNPs and indels without mapping reads MALVA calls correctly more indels than the most widely adopted genotyping pipelines Mapping-free approaches are as accurate as...1566 days ago
Google Colab : Google Colab is a free cloud service and now it supports free GPU!
You can: improve your Python programming language coding skills. develop deep learning applications using popular libraries such as Keras, TensorFlow, PyTorch, an...1563 days ago
Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
...d memory efficient. With a 5 GB memory footprint for 100 million reads, it can be run on virtually any desktop or server. The software is available free of charge under the GNU Gener...1558 days ago
1555 days ago
Dahak: benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
...nome binning, and gene assignment. We aim to deliver the analytical framework as a robust and reliable containerized workflow system, which will be free from dependency, installation...1494 days ago
1426 days ago
The Breeding API (BrAPI) project
...g databases. BrAPI is a standardized RESTful web service API specification for communicating plant breeding data. This community driven standard is free to be used by anyone interest...1221 days ago
Pandoc: The universal markup converter
Pandoc is a Haskell library for converting from one markup format to another, and a command-line tool that uses this library. Pandoc is a free and open-source document converter, widely used as a writing tool and as a basis for publishing workflows. More at https://pandoc.org/1210 days ago
1169 days ago
Kmer: a suite of tools for DNA sequence analysis
...nctions. Meryl: An out-of-core k-mer counter. The amount of sequence that can be processed for any size k depends only on the amount of free disk space....998 days ago