Software packages for next gen sequence analysis
...xt Generation Sequencing data analysis. * JMP Genomics - Next gen vi...ating with Lasergene Sequence Analysis software for additional analy...e genomes, and carry out post-analysis. ZOOM is developed to be high...pecifically optimized for the analysis of large numbers (millions) o...3237 days ago
Comprehensive list of visualization tools for biological pathways
The study of biological pathways is a key to un...me one leading method in -omics data analysis and visualization. Followi...ww.biotapestry.org/ Caleydo Visual analysis framework targeted at biomole...PathVisio Biological pathway analysis software that allows drawing,...2281 days ago
Binding Site Prediction in Protein !
...PocketPicker Grid-based technique for the analysis of protein pockets. PocketPicke...ediction ConSurf Identification of functional regions in proteins by surfac...e to structural restraints from those due to functional restraints. &n...2196 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...can be directly imported for analysis.” Alignment feature: Sup...m NCBI Ingenuity Variant Analysis (QIAGEN) allows for variant...lignment, variant calling and analysis of NGS data Supported workflow...tation scoRing toOL; Combined functional annotation score of nonsyno...2903 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of...nome.Interspersed RepeatsProcessed Pseudogenes, Retrotranscripts, SINES - Non-function...2205 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
...------ Gene Set Clustering based on Functional annotation GeneSCF s...he list of genes given by the users based on functional annotation (Gene Ontology, KE...chment tools is that, it performs enrichment analysis in real-time (v1.1 and above)...2866 days ago
2863 days ago
Genome Assembly Tools and Software - PART1 !!
...; DNA Sequence Assembly & Analysis DNA Sequence Assembler is re...uence assembly , DNA sequence analysis, contig editing, file format co...ho Apps provide more specific functionality to Clotho such as viewing...Genome Assembly and Variation Analysis Cortex is an efficient and...2680 days ago
Awesome perl frameworks, libraries and software - PART 1
...is mainly written as a perl library but its functionality also depends on freely ava...es for Next-Generation Sequencing (NGS) data analysis masukomi/jsonpath-perl ...erl Framework for High Throughput Sequencing analysis gbarr/perl-libnet - per...2483 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two...diagram, resulting from a cladistic analysis, which depicts a hypothetical...methods. ingroup -- In a cladistic analysis, the set of taxa which are hy...es of characters used in a cladistic analysis, either original or derived....2456 days ago