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Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set that facilitate...f the information here is relevant to these projects. The consistency of the annotation across species and the focus...2989 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
This tutorial covers topics independently of HOMER, and represents knowledge which is i...onductor General Tips for Data Analysis Excel workarounds, adding gene annotation, X-Y plots tips, etc....2931 days ago
MEDEA: Comparative Genomic Visualization with Adobe Flash
As the number of sequence and annotated genomes grows larger, the need to understand, c...uch large and complex data sets. More at http://www.broadinstitute.org/annotation/medea/2931 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate ba...hat enables researchers to build custom annotation pipelines. RASTtk offers a ch...he ability to add custom features to an annotation job. RASTtk also accommodates...2930 days ago
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PolyPhen-2: Prediction of functional effects of human nsSNPs
PolyPhen-2 (Polymorphism Phenotyping v2) is a tool which predicts possible impact of an amino acid substitution on the structure and function of a human protein using straightforward physical and comparative considerations.2904 days ago