List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread and has, or is conjectured to have, a biological significance. For p...1995 days ago
1550 days ago
Ancient whole genome duplication (WGD) detection tools !
...bout the analysis process of WGD. I searched for the keyword "...ps://peerj.com/articles/6303/WGDdetector: https:// github.com/...icle introduces the usage of wgd. Wgd cannot be installed dir...PREFIX=~/opt/miniconda3/envs/wgd/make -j 4 make insatall Ta...1157 days ago
Useful Bioinformatics Analysis Tools !
...ression of sequencing data, Scientific Reports, 2020; 10(578): GDC Compressor of collections o...sequences. • Deorowicz, S., Danek, A., Niemiec, M., GDC 2: Compression of large coll...865 days ago
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List of comparative genomics resources !
...QTL data on livestocks and animal species. BGDB -- Bovine Genome Database F...of human, mouse, rat and fish sequences. EPGD -- Eukaryotic Paralog Group D...nome comparisons and functional analysis. MBGD -- Microbial genome database...679 days ago
Understanding DUMP files from NCBI Taxonomy database !
...id in GenBank taxonomy database parent tax_id -- parent node id in GenBank taxonomy database rank -- rank of this node (superkingdom, kingdom, ...) embl co...662 days ago