Results for "Gene expression"
Top-level pages
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and r...ool and produce others. * NextGENe - de novo and reference assem...omas Wu and Colin Watanabe at Genentec. C/Perl for Unix. * gnuma...ool REPuter, but is much more general, with a very flexible user...alization Tool. It provides a generic pl...3236 days ago
Comprehensive list of visualization tools for biological pathways
...ding, visualizing and sharing gene regulatory network models ove...ml GenMAPP Visualization of gene expression and other genomic data...d visualizing microarray gene-expression data and integrated biologica...d pathways and reactions from gene lists http://www.reactome.org/skyp...2280 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ay and PCR data include: Gene expression including alternative splicing, miRNA expression, Genome Wide Associatio...phenotype.”; no actual expression data used, only in silico exp...e version gives comprehensive genetic report Mutadelic Descrip...2902 days ago
Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particular area? C...to research students in the areas of general and applied science. BD B...onsider one of these prestigious (and generous) endowments. Whitaker In...ientific knowledge and train the next generation...2931 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discov...nome.Interspersed RepeatsProcessed Pseudogenes, Retrotranscripts, SINES - Non-functional copies of RNA genes which have been reintegrated..."able was I ere I saw elba")—with genetic pa...2204 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
----------- Gene Set Clustering based on Functional annotation GeneSCF serves as command line tool for clustering the list of genes given by the users based on f...ene list in the form of Entrez Gene ID (UIDs) or Official gene sy... The advantage of using GeneSCF ov...2865 days ago
- Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 &n...a29/sample.GTF) file to annotation table format. It generated two files1) Transcript w...5ae57fc8b4a14c7f4/sample.GTF_enst_annotation.txt)2) Gene wise...
2099 days ago
- alignment: the mapping of a raw sequence read to a location within a ref...quality scores for each base; usually generated by sequencing machines....structural rearrangements, including gene fusions. Phred-scaled probab...rangements. See also BCF format. NextGeneration...
2862 days ago
Genome Assembly Tools and Software - PART1 !!
...o address variable transcript expression levels. It first filter...cripts can also estimate gene expression levels, identify candidate po...interpretation and hypothesis generation. MAIA 0.5 – Integr...ed isoforms and estimates the expression level of them. VirAmp &n...2679 days ago
Awesome perl frameworks, libraries and software - PART 1
...rs, passwords, EXPECT regular expressions, macros, ... noxxi/p5...d to only one of all possible gene isoforms miyagawa/web-scrape...erface to 0MQ2 trizen/obmenu-generator - A fast menu gener...lection of utilities for Next-Generation Sequencing (NGS) data analysi...2482 days ago
