Results for "Genome Sequence"

Files

  • Detect the sequence pattern and its location in fasta file with match and mismatches information.

    This script is one of my old script to detect some centromeric pattern in chromosomes. User can also control the number of mismatches allowed through command line .. To run: perl centro.pl

    3866 days ago

  • Clean the FASTA file

    Mostly FASTA file contain NNN characters, which can be replace by random A T G C character with this perl script. It also print the FASTA sequence name, N's counts, nucleotide count and percentage details at command prompt/standard output.  

    3864 days ago

  • Bioinformatician kidnaped !!!

    Some fish kidnaped a bioinformatician for their genome analysis.

    3851 days ago

  • Alien Spy !!!

    Alien spy are looking for human genome sequences .. 

    3838 days ago

  • Alien Genome !!!

    Genome sequencing, analysis and expression of Alien genome. Note: This image/cartoon is create only for fun. It has nothing to do with any scientific findings.

    3429 days ago

  • Structural variants PPT

    1000 Genomes data tutorial at ASHG Structural variants presentation by Jan Korbel European Molecular Biology Laboratory (EMBL) Heidelberg Genome Biology Research Unit Reference:  https://www.genome.gov/pages/research/der/1000genomesprojecttutorials/structuralvariants-jankorbel.pdf

    2795 days ago

  • Download blasr 1.3 version

    DOWNLOAD LINK: https://github.com/BioInf-Wuerzburg/proovr...ite to the disk... 0.09 sec[bwa_aln_core] 70778880 sequences have been processed.[bwa_aln...ite to the disk... 0.06 sec[bwa_aln_core] 70989574 sequences have been processed.[main] V...

    2149 days ago

  • Evaluation of genome assembly software based on long reads

    ...o assemblies of hundreds of microbial genomes and highly contiguous recons...ns of many dozens of plant and animal genomes, enabling new insights into evolution and sequence diversity. They have also b...ny of the gaps in the human reference genome. In this report, we compare an...

    1918 days ago

  • analyzing codon usage

    perl script analyzing codon usage in an input sequence to evaluate how efficiently it will be expressed in Anopheles gambiae. The input codon usage table derived from highly‐expressed A. gambiae genes is appended below.

    1639 days ago

  • Spades tutorial PDF

    SPAdes—St. Petersburg genome Assembler—was originally developed for de novo assembly of genome sequencing data produced for...Ades package and that are used for assembly of metagenomes...

    822 days ago