Results for "Genome Size"
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Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and RNA sequenci...gth, which offers great prospects for genome assembly. Generally, assemble...noOK NanopolishNanopore analysis and genome assembly softwarehttps://gith...b.com/arq5x/poretools SSPACE-LongReadGeno...2320 days ago
BBTools for bioinformatician !
...e threads, because the insert-size average is calculated on a per-...ce of reads with short insert sizes, in case you don't know what a...Code: $ randomreads.sh ref=genome.fasta out=reads.fq len=100 re...Code: $ randomreads.sh ref=genome.fasta out=reads.fq len=100...2270 days ago
Basic command-line to run BLAST
The goal of this tutorial is to run y...ask task_name] [-db database_name] [-dbsize num_letters] [-gilist filenam...t output_file] [-evalue evalue] [-word_size int_value] [-gapopen open_pen...ask task_name] [-db database_name] [-dbsize num_letters] [-gilist filenam...2243 days ago
Popular bioinformatics educational resources !
Followings are the list of popular bioinformatics educational resources Bii.a-star.edu....hnology, Finland. Ornl.gov/sci/techresources/Human_Genome/education/education.shtml A resource for introductory information on the Human Geno...2192 days ago
- LiftOver is a necesary step to bring all genetical analysis to the same reference bu...LiftOver can have three use cases: (1) Convert genome position from one genome assembly to another genome as...ber from one build to another (3) Convert both geno...
2159 days ago
Install ImageMagick from Unix Source
ImageMagick builds on a variety of Unix and Unix-like ope...pkg-config is at least version 0.20... yeschecking size of size_t... 8checking for C compiler...off_t... yeschecking for pid_t... yeschecking for size_t... yeschecking for ssize_t....2145 days ago
chromoMap-An R package for Interactive visualization and mapping of human chromosomes
chromoMap is an R package that provides interactive, configurable and elegant graphics...us in the scientific interpretations and research work. Because of the enormous size of the chromosomes, it is imp...2140 days ago
- ...if (seq_region.size() < kmer_length) { continue;...entheses] return ( filename.size() > 2 &&...e] for (i=0; i<=d.isize()-k; i++) {...be under development) # # --genome_guided_bam :genome guided mode, provide path t...
2132 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespread and has, or is con...ites. PEDANT -- Protein Extraction, Description and ANalysis Tool Conduct geno...1992 days ago
How to set up SSH on Ubuntu 18.04
SSH, also known as Secure Shell or Secure Socket Shell, is a network protocol that gives users, particularly system administrators, a secure way to access a computer o...1990 days ago
