Comment on "List of non-commercial NGS genotype-calling software"
...Structural variant and indel caller for mapped sequencing data. [ paper-2015 ]gridss – GRIDSS: the Genomic Rearrangement IDentification Software Suite. [ paper-...1150 days ago
Comment on "Coronavirus Resources !"
Range of SARS-CoV-2 and SARS-CoV data for drug target identification and prioritisation. https://www.covid19dataportal.org/targets?db=complex-portal1431 days ago
Comment on "Tools for Searching Repeats And Palindromic Sequences"
Check out this GAP-Seq: a method for identification of DNA palindromes https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-3941543 days ago
Comment on "Running Trinity on RNA-seq !"
Once your assembly is complete, there are several analyses you will likely want to pursue to explore aspects of the biology of your organism based on your assembled transcr...2131 days ago
Comment on "Structural variation: the hidden genomic treasure"
I like this tool GRIDSS: the genomic rearrangement identification software suite. A high-speed next-gen sequencing structural variation caller. GRIDSS calls variants based on al...2710 days ago
Comment on "Does anyone have Nanopore latest updates?"
...pore are continuing to appeal to the field researcher, with potential applications in monitoring disease outbreaks, and real-time species identification in the fight against wildlife...2906 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
Thanks for such a useful list of synteny identification tools. If anyone interested to analyze synteny at the protein level, they can try this tool https://github.com/thiesgehrmann/proteny2992 days ago
3596 days ago
3611 days ago