ITIS: the Integrated Taxonomic Information System!
ITIS, the Integrated Taxonomic Information System! Here you will find authoritative taxonomic information on plants, animals, fungi, and microbes of North America and the world. We are a&nb...1710 days ago
SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
The Docker image is available at https://hub.docker.com/r/biodatageeks/. Supplem...code repository: https://github.com/ZSI-Bio/bdg-sequila • Operating system: Platform independent •...1603 days ago
CLARK: Fast, accurate and versatile sequence classification system
CLARK, a method based on a supervised sequence classification using discriminative k-mers. Considering two distinct specific classification problems (see the artic...1541 days ago
Dahak: benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
Dahak is a software suite that integrates state-of-the-art open source tools for meta...liver the analytical framework as a robust and reliable containerized workflow system, which will be free from depe...1487 days ago
Supernova: generates phased, whole-genome de novo assemblies from a Chromium-prepared library.
Supernova generates phased, whole-genome de novo assemblies from a Chromium...ibrary. Please see Achieving Success with De Novo Assembly and System Requirements before ...1435 days ago
Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data
Ktrim is written in C++ for GNU Linux/Unix...linked with libz v1.2.7 for Linux x86_64 system. If you could not run it (whi...) or you want to build a version optimized for your system, you can re-compile the progr...1179 days ago
960 days ago
Understanding pango networks !
In the vast majority of instances it is expected that Pang.... https://www.pango.network/the-pango-nomenclature-system/statement-of-nomenclature-rules/ https://www.pango.network/how-does-the-system-work/what-are-pango-lineages/...932 days ago
873 days ago
oGNM:Conformational dynamics based on contact topology in a coarse-grained presentation
Gaussian Network Model (GNM) is a powerful tool to sample...l normal modes are the same as those in unperturbed systems (in the absence of the envir...efficient (saving 3/4 time, assuming equal size of system and environment), more memory...839 days ago