3675 days ago
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mrFAST: Micro Read Fast Alignment Search Tool
...the discovery of structural variation and segmental duplications. mrFAST maps short reads with respect to user defined error threshold, including indels up to 4+4 bp. This manual, de...2953 days ago
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2191 days ago
WhatsHap: fast and accurate read-based phasing
... WhatsHap: fast and accurate read-based phasing) Works well with Illumina, PacBio, Oxford Nanopore and other types of reads It phases SNVs, indels and even “complex&rdquo...2191 days ago
Nanopolis: polish a genome assembly
...ore sequencing data. Nanopolish can calculate an improved consensus sequence for a draft genome assembly, detect base modifications, call SNPs and indels with respect to a reference g...2132 days ago