Results for "Information"
Bio-Scripts
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stothard (paul.stothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Esca...2912 days ago
Blast result parser with Perl and Bioperl
...sis. # use strict; use warnings; use Bio::SearchIO; # Usage information die "Usage: $0 \n", if (@A...end\thit_start\thit_end\tpositives\tidentical\n"; # extraction of information for each result recursively...2911 days ago
Converting from Windows-style to UNIX-style line endings with dos2unix
...n$ sudo apt install dos2unix [sudo] password for bioqueen: Reading package lists... Done Building dependency tree Reading state information... Done The following packag...1173 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...pt install ./atom-amd64.deb [sudo] password for bioqueen: Reading package lists... Done Building dependency tree Reading state information... Done Note, selecting 'ato...1172 days ago
- ...EXECUTABLE ON YOUR SYSTEM. # System requirements: requires perl and perl modules # DB_File and GD.pm, available from CPAN. # For usage information, run this program with the fl...
2689 days ago
Calculate ATGC percentage in parallel with perl
...lue $sequences{$id} = $seq; } my $max_procs = 5; my @names = keys %sequences; # hash to resolve PID's back to child specific information my $pm = new Parallel::Fo...2652 days ago
Genetic Algorithms demonstration with word DNA in Perl
...1 = $parent->{dna}; my $dna2 = $parent2->{dna}; # note we do operations on BYTES, not BITS. This is because bytes # are the unit of information (and preserving them is the f...2368 days ago
Plot custom gene density with R
library(karyoploteR) pp2246 days ago
Installing Porechop on Ubuntu !
...input read format (default: auto) -v VERBOSITY, --verbosity VERBOSITY Level of progress information: 0 = none, 1 = some, 2...2102 days ago
- ...csSpark (BETA Tool) Collects insert size distribution information on alignment data Collec...om a SAM or BAM file by applying one of several filters. FixMateInformation (Picard) Ver...
2072 days ago
