Results for "Information Officer"
Bio-Scripts
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stothard (paul.stothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Es...2912 days ago
Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GNU Ge...ct; use warnings; use Bio::SearchIO; # Usage information die "Usage: $0 \n", if (@A..._end\tpositives\tidentical\n"; # extraction of informa...2910 days ago
Converting from Windows-style to UNIX-style line endings with dos2unix
Lenovo-ideapad-320-15ISK:~/Downloads/abc/bin$ sudo apt install dos2unix [sudo] password for bioqueen: Reading package lists... Done Building dependency tree Reading state informa...1173 days ago
Install ATOM editor on Elemantory OS / Ubuntu
#Download ATOM deb file from https://atom.io/ https://atom.io/download/deb (base) bioqueen@bioqueen-Lenovo-ideapad-...Reading package lists... Done Building dependency tree Reading state informa...1172 days ago
- #!/usr/local/bin/perl -w # NOTE: YOU MUST CHANGE THE LINE ABOVE TO POINT TO # THE FULL PATH OF THE PERL EXECUTABLE ON...l and perl modules # DB_File and GD.pm, available from CPAN. # For usage informa...
2689 days ago
Calculate ATGC percentage in parallel with perl
#!/usr/bin/perl use strict; use Parallel::ForkManager; use Bio::SeqIO; #usage: perl testParallel.pl my %seq...@names = keys %sequences; # hash to resolve PID's back to child specific informa...2652 days ago
Genetic Algorithms demonstration with word DNA in Perl
#!/usr/bin/perl -w # GA demonstration with word DNA (512 bits) use strict; use Data::Dumper; # individuals in the p...do operations on BYTES, not BITS. This is because bytes # are the unit of informa...2368 days ago
Plot custom gene density with R
library(karyoploteR) pp2246 days ago
Installing Porechop on Ubuntu !
➜ Tools git:(master) ✗ git clone https://github.com/rrwick/Porechop.git Cloning into 'Porechop'... remote: Counting...VERBOSITY, --verbosity VERBOSITY Level of progress informa...2102 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/releases/...(BETA Tool) Collects insert size distribution information on alignment data Collec...e by applying one of several filters. FixMateInforma...
2071 days ago
