Results for "Install"

Bio-Scripts

  • Setting up autoConTAMPR !

    ...tendra Narayan" ---> Using cache ---> c0e65f263890 Step 5/16 : RUN apt-get clean && apt-get update --yes && apt-get install --yes git && apt-get install -y wget ---> Using cache...

    1451 days ago

  • Install SibeliaZ in your Linux cluster !

    (jitenv) jitendra@Bathymodiolus:~$ conda install -c bioconda sibeliaz Collecting package metadata (current_...Total: 4.5 MB The following NEW packages will be INSTALLED: _anaconda_depends pk...

    1241 days ago

  • Install fastqc using conda !

    (JitMetaENV) ➜ JitMeta conda install -c bioconda fastqc Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1225 days ago

  • Install trimmomatic using conda !

    (JitMetaENV) ➜ fastQC_out conda install -c bioconda trimmomatic Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1225 days ago

  • Install spades using conda !

    (JitMetaENV) ➜ fastQC_out conda install -c bioconda spades Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1225 days ago

  • Install assembly-stats with conda !

    (JitMetaENV) ➜ META_PE conda install -c bioconda assembly-stats Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1225 days ago

  • Install Kraken2 using conda !

    (JitMetaENV) ➜ day2 conda install -c bioconda kraken2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying wit...

    1224 days ago

  • Install prokka using conda !

    (JitMetaENV) ➜ assembly conda install -c bioconda prokka Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen solve. Retrying w...

    1224 days ago

  • Install seqtk using conda !

    (JitMetaENV) ➜ META_PE conda install -c bioconda seqtk Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1224 days ago

  • Install bwa using conda !

    (JitMetaENV) ➜ assembly conda install -c bioconda bwa Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.

    1224 days ago