2884 days ago
Genome Assembly Tools and Software - PART1 !!
...d graph-based model. We therefore list many genomle assembly tools here. We main...ge information or sequencing reads. GAML 0.1 – Genome Assembly b...ntalized assembler is a novel method for the assemlby of high quality physical ma...2701 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort comparison routine variables. @ARGV The command-line args....2659 days ago
Awesome perl frameworks, libraries and software - PART 1
...erTools - Perl Power Tools gshank/html-formhandler - a Perl Moose HTML form handler mskcc/vcf2maf&n...interface to Git repositories vti/text-haml - Haml parser in Perl j...eaches the birds and the bees rjray/rpc-xml - A Perl implementation...2504 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...values Software (C++) http://www.dei.unipd.it/~ciompin/main/qcluster.html Reads error correction Ligh...-words) R package http://www-rcf.usc.edu/~fsun/Programs/NGS-MC/NGS-MC.html Species identification/taxon...2386 days ago
2366 days ago
Single Cell RNAseq data analysis tutorial !!
...ell RNA-Seq Profiling Analysis https://research.cchmc.org/pbge/sincera.html SC3 – consensus cluste...ontrol Single-cell RNA-seq Data Quality http://www.morgridge.net/SinQC.html TSCAN: Pseudo-time reconstru...2366 days ago
2366 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database and provides detailed annotation and pathway analysis. Takes several h...2347 days ago
Bioinformatics Web Application Development with Perl
...e become web applications. Development has moved from generating static HTML to both client and server sid...ew CPAN distributions and get the job done early. If you need to consume XML from a remote service and emi...2336 days ago