Comment on "Mugsy: multiple whole genome alignment tool"
...genome name in the output files (eg. genome1 from genome1.fsa). Header lines in the FASTA files should not contain ':' or '-' to avoid parsing problems. View or parse MAF output...1300 days ago
Comment on "REAPR: a universal tool for genome assembly evaluation"
...erything’s ok! in this case, no output is good output, since the only output from the command is the potential problems with the contig names. If you run into any problems, run reapr facheck <a...1352 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Biology Direct journals accept short notes/ application notes https://biologydirect.biomedcentral.com/submission-guidelines/aims-and-scope1357 days ago
Comment on "Setting up autoConTAMPR !"
...with LWP:http://espejito.fder.edu.uy/cpan/authors/id/M/MI/MIYAGAWA/CHECKSUMSChecksum for /root/.cpan/sourc...with LWP:http://espejito.fder.edu.uy/cpan/authors/id/I/IS/ISHIGAKI/CHECKSUMSChecksum for /root/.cpan/sourc...1457 days ago
Comment on "List of gene ontology software and tools"
Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma'ayan A. Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics. 2013;128(14). http://amp.pharm.mssm.edu/Enrichr/1507 days ago
Comment on "The Raku Programming Language"
Try online interface to run your Raku programs https://glot.io/new/perl6 A nice place to test and check the program on cloud1550 days ago
Comment on "Biological databases !"
NCBI released a set of GATK-specific dbSNP VCF's, with the "chr" attached. Those can be accessed at ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606/VCF/GATK/.1558 days ago
Comment on "Biological databases !"
List of useful biological databases at ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/1558 days ago
Comment on "Various scholarships around the world !!"
The Start-up Research Grant (SRG) scheme aims to assist researchers to initiate their research career in a...hers working in frontier areas of science and engineering to establish themselves and move on to the mains...1566 days ago
Comment on "Complete genome sequence of Wuhan seafood market pneumonia virus is out !"
CBI teams at GenBank®, the Sequence Read Archive (SRA), NCBI Virus, and BLAST continue to rapidly process and release data associated with this outbreak as it become...1567 days ago