3029 days ago
BBTools for bioinformatician !
...slow" flag.--------------------------------------------------------------msa.sh and curprimers.shQuoted fr...ote another pair of programs specifically for working with primer pairs, msa.sh and cutprimers.sh. msa.sh...2264 days ago
Bioinformatics tools and software
...;Compare two multiple alignments for benchmarking. PALS >Whole-genome alignment. PREFAB >Protein Reference Alignment Database. MSA benchmark collection >Sele...2854 days ago
DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms
...ism, is a software package for the analysis of DNA polymorphisms using data from a single locus (a multiple sequence aligned -MSA data), or from several loci (a Multiple-MSA data, such as formats generat...1250 days ago
3940 days ago
Des Higgins: Visualizing Multiple Sequence Alignments
Copyright Broad Institute, 2013. All rights reserved. Des Higgins (http://www.bioinf.ucd.ie) gives a very entertaining introduction to the visualization of multiple sequence alignment, and to his widely-used Clustal tool. He highlights the emerging challenge of managing alignments with a very lar...Tags: MSA, Visualization
3715 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
MSA algorithms http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3261699/3660 days ago