Results for "MYSQL Tutorial for beginner"
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Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of th...ensible to store additional information about sequence ranges,...Rsamtools provides functions for parsing and inspecting samtoo...-seq processing pipeline SPP Tutorial MACS SIPeS RNA-Seq An...3638 days ago
Commercial and public next-gen-seq (NGS) software
...an Genome Analyser - Software for Next Generation sequence asse.... Uses a Burrows-Wheeler-Transformed (BWT) index. Link to discu...of whom are at The Institute for Genomic Research in Maryland,...ncy-based Consensus Algorithm for De Novo and Reference-guided...Smith Genome Sciences Centre. MySQL ba...3532 days ago
A guide for complete R beginners !
This tutorial is intended to introduce users quickly to the basics o...ble, plot some graphs, and perform some basic statistics. More extensive tutorials can be found on the pro...tional) Download and save the tutorial data set from http://bioinformatic...3375 days ago
Software packages for next gen sequence analysis
...mapping and analysis pipeline for short DNA sequences produced...and Ewan Birney from EMBL. C for POSIX. * GenomeMapper - Genom...CSHL. (published in BMC Bioinformatics). POSIX OS required. *...assembler specially designed for short read sequencing technol...Smith Genome Sciences Centre. MySQL ba...3256 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...s, Impute2 GWAS files, HapMap format, MACH output, + 50 other f...r, specifically tailored to Oxford Nanopore Reads, written in P...uo;extract causative variants for monogenic and sporadic geneti...projects”; dependent on MySQL, R, and ANNOVAR Input: Ou...sociation studies, especially for auto...2922 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner-perl - MySQLTuner is a script written in P...tion and make recommendations for increased performance and stability. kraih/mojo...pshot/rsnapshot - a tool for backing up your data using rsync (...2503 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarrays) in the late 00’s...se studies Insufficient for studying heterogeneous system...gle Cell RNAseq data analysis Tutorial A step-by-step workflow...lab/SCell Beta-Poisson model for single-cell RNA-seq data anal...cLVM is a modelling framework for sing...2364 days ago
- RNA-sequencing (RNA-seq) has a wide variety of applications, but no single analysis pipel...tion and eQTL mapping. A survey of best practices for RNA-seq data analysis RNA-se...q exercise An open RNA-Seq data analysis pipeline tutorial...
2364 days ago
Converting BLAST output into CSV
Suppose we wanted to do something with all this BLAST output. Genera...xt output is in some specific format. If the program is popular...e one or more parsers written for that format – these are...t. Let’s conclude this tutorial by converting the BLAST...‘git’ more later; for now,...2350 days ago
Bioinformatics Web Application Development with Perl
...s. Perl is still well suited for developing modern web apps. T...chniques of modern Perl. See, for example, the ever-growing lis...raced the Plack/PSGI standard for Perl web deployment and recen...re from SQLite to PostgreSQL, MySQL, Oracle, and more. Rose::D...he CPAN has modules for almo...2335 days ago
