Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference a...hor Anthony J. Cox for the Solexa 1G machine. * Exonerate - Various forms...ined from next-generation sequencing machines (specifically that of Solexa...rom the 454 Life Sciences sequencing machines...3242 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...hese high-throughput sequencing machines are supported: The 454 FLX S...hese high-throughput sequencing machines are supported The 454 FLX Sy...Description: Structural Variant Machine - predicts indels, uses split...ons; software package, combines machine learning model with biology and statis...2908 days ago
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Genome Assembly Tools and Software - PART1 !!
...reads.System requirements64-bit machine with g++ compiler or gcc in g...on massively parallel sequencing machines and the ability to process a...ning-fast contig assembly, short learning curve, user-friendly editing...reads, even on a 32-bit desktop machine. ABySS 1.9.0 – de n...2685 days ago
Awesome perl frameworks, libraries and software - PART 1
...it scripts in Perl sartak/webmachine-perl - A Perl port of Webmachine rhuss/jmx4perl - JMX ac...ojo for Perl-5.8.7 briandfoy/Learning-Perl-Sample-Files - Extra files for use with Learning Perl theory/uri-db - Pe...n for SPORE houseabsolute/webmachine-perl - A Perl port of Web...2488 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database and provides detail...oduce submission-ready, annotated draft genomes. MyPro installed as a virtual machine...2331 days ago
Bioinformatics Web Application Development with Perl
...ity you receive is well the small cost of the learning curve. Even better, DBIC ca...arguments, the return on your investment from learning the modern way is impressive....ation with a local testing server on your own machine as you can to your production...2321 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformatician to...and System shutdown — shut down machine reboot — restart machine date — show the cu...m remote server to the dir directory on your machine...2280 days ago
Python learning resources for bioinformatics and computational biologist !
.../github.com/CodementorIO/Python-Learning-Resources Following are the...TML, PDF, EPUB, Mobi) Building Machine Learning Systems with Python - Wi...hink Like a Computer Scientist: Learning with Python, Interactive Edit...- 2.x) The Coder's Apprentice: Learning Programming with Python 3&nbs...2254 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinformatics | Oxfor...edu.cn/ICEberg/index.php Satsuma - Evolution and Genomics http://evomics.org/learning/genomics/satsuma/ A complete...2241 days ago