How to install Perl modules manually, using CPAN command, and other quick ways
...applications (default version)python-biopython-sql - Biopython support for the BioSQL database schemalibbtlib-perl - library for basic sequence manipulation # sudo apt-get install biope...3963 days ago
Java and BioJava Tutorial links
BioJava provides analytical and statistical routines, parsers for common file formats and allows the manipulation of sequences and 3D structures. The goal of this bookmark is to provide useful links for bioinformatician. Please add more useful Java and BioJava links here ...3916 days ago
Orione – a web-based framework for NGS analysis in microbiology
...lex, reproducible workflows for NGS microbiology data analysis. Enabling microbiology researchers to conduct their own custom analysis and data manipulation without software installation...3587 days ago
Bio++ : C Language libraries for your biological need
...ral implementations. Support for alignments.Various I/O formats supported: Fasta, Mase, CLustal, Phylip, DCSE, GenBank (sequence only).Sequence manipulation: truncation, concatenation, s...3960 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...nd to the point. Materials from a series of mini-courses in R taught in 2010 at UCLA are available: Intro to programming and graphics Data manipulation and functions Graphics for e...3792 days ago
Next generation sequencing in R or bioconductor environment
...ontainers, string matching algorithms, and other utilities, for fast manipulation of large sets of biological s...ead package provides input, quality control, filtering, parsing, and manipulation functionality for short read...3637 days ago
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Postdoctoral Associate - Bioinformatics at Duke University Medical Center
...high-dimensional data (microarray, SNP, CNVs) and of validation approaches. In addition, experience in penalized regression methods, data base manipulation; and strong programming skill...3933 days ago
Junior Research Fellow (JRF) / Project Fellow @ Kalasalingam University
...Life Sciences Desirable Experience: Minimum of two years research experience in any of the following areas: Immunology / Microbiology / Gene Manipulation / Bioinformatics Intereste...3803 days ago
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SeqFu: A Suite of Utilities for the Robust and Reproducible Manipulation of Sequence Files
A general-purpose program to manipulate and parse information from FASTA/FASTQ files, supporting gzipped input files. Includes functions to interleave and de-interleave FASTQ files, to rename sequences and to count and print statistics on sequence...Tags: SeqFu, Suite, Utilities, Robust, Reproducible, Manipulation, Sequence, Files
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molinspiration: broad range of cheminformatics software tools supporting molecule manipulation
Molinspiration offers broad range of cheminformatics software tools supporting molecule manipulation and processing, including SMILES and SDfile conversion, normalization of molecules, generation of tautomers, molecule fragmentation, calculation of various molecular properties needed in...Tags: molinspiration, broad, range, cheminformatics, software, tools, supporting, molecule, manipulation
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Comment on "Bio++ : C Language libraries for your biological need"
...onary model).bppAncestor (Reconstruct ancestral sequences).bppConsense (Build consensus trees and compute bootstrap values).bppSeqMan (Sequence manipulation and file format conversion).b...3839 days ago