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• • Neel@neelam

  

  Neel commented on a page titled Most Commonly used Awk by Bioinformatician 3210 days ago

  Rename the name of multi fasta sequesnces with awk awk '/^>/{print ">chromosome" ++i; next}{print}' < file.fasta
• • John Parker@parker

  

  John Parker commented on a page titled Most Commonly used Awk by Bioinformatician 3744 days ago

  One of the best known cheat sheet for AWKians www.catonmat.net/download/awk.cheat.sheet.txt
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a page titled Most Commonly used Awk by Bioinformatician 3857 days ago

  To deal with simple CSV: awk -F, '{print $1,$2}'
• • Shruti Paniwala@shruti

  

  Shruti Paniwala commented on a page titled Most Commonly used Awk by Bioinformatician 3893 days ago

  Some of the useful Unix onliner http://genomics-array.blogspot.in/2010/11/some-unixperl-oneliners-for.html

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• 

  Most Commonly used Awk by Bioinformatician

  Last updated 4143 days ago by Neel Comments (13)

  • Awk
  • Bioinformatics

    Awk is a programming language that is specifically designed for quickly manipulating space delimited data. Although you can achieve all its functionality with Perl, awk is simpler in many practical cases. Why awk? You can replace a pipeline...

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