BOL: Results for "Maq"

Results for "Maq"

- Jit@jit.aber
Maq: Mapping and Assembly with Quality
Maq stands for Mapping a...reads to reference sequences. Maq is a project hosted by S...ttp://sourceforge.net/projects/maq/. Maq is previously known as...a bacterial genome. Download maq, maq-data and maqview at the&...-i -c consensus.cns all.map; maqview -c consensus.cns all.map...
2725 days ago
- Jit@jit.aber
Seal: SEquence ALignment evaluation suite
...tly mapped. Computing run times and measures of accuracy. Seal has interfaces to evaluate the following software packages: Bowtie BWA MAQ mrFAST mrsFAST Novoalign...
2318 days ago
+1 more Bookmarks

- Surabhi Chaudhary@surabhi
Commercial and public next-gen-seq (NGS) software
...ee's BWT Alignment program - a progression from Maq. BWA is a fast light-weighted...ors at Brigham Young University. C source/Unix. MAQ - Mapping and Assembly with Q...454 pyrosequences. Developers at Boston College.Maq is also able to find SNPs wit...
3523 days ago
- Rahul Nayak@rahul
Software packages for next gen sequence analysis
...Mac OS X. * BWA - Heng Lee's BWT Alignment program - a progression from Maq. BWA is a fast light-weighted...g statistics. From authors at Brigham Young University. C source/Unix. * MAQ - Mapping and Assembly with Q...
3247 days ago
+1 more Top-level pages

- Jitendra Narayan@admin
Maq: Mapping and Assembly with Qualities http://maq.sourceforge.net/ #Maq #Mapping #Assembly #Qualities
3587 days ago
- Jit@jit.aber
reformat.sh in=reads.fq out=highQuality.fq maq=16 (that will throw away all reads with average quality below 16) #Filter #BBMap #Quality
2162 days ago

- Nidhi Rajput@nidhi
Bioinformatics WalkIn at NII
...se, the applicant should have knowledge of the following: Programming: Perl and Python. Operating system: Linux and Windows. NGS Analysis tools: Maq, BWA, Bowtie, SAM tools, BEDT...
3170 days ago

- Jit@jit.aber
Setting up autoConTAMPR !
(base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 -...
1446 days ago

- Jit@jit.aber
Comment on "Setting up autoConTAMPR !"
Setting up mafft (7.123-1) ...Setting up maq (0.7.1-5) ...Setting up muscle (1:3.8.31-1) ...Setting up perl-doc (5.18.2-2ubuntu1.7) ...Setting up perl-tk (1:804.031-1build1) ...Sett...
1446 days ago
- Neelam Jha@neelam
Comment on "Commercial and public next-gen-seq (NGS) software"
...du/illumina_docs/Velvet:http://www.ebi.ac.uk/~zerbino/velvet/Maq (Mapping and Assembly with Quality): http://maq.sourceforge.net/maq-man.shtml...ww.novocraft.comBWA - Burrows-Wheeler Alignment Tool: http://maq.sourceforge.net/bwa-man.shtml...
3626 days ago