Results for "Master"

Bio-Scripts

  • Install HTSLIB on Ubuntu !

    ➜ Tools git:(master) ✗ wget https://github.com/samtools/htslib/relea...ar.bz2’ saved [1178859/1178859] ➜ Tools git:(master) ✗ tar -vxjf htslib-1.9.tar.b...config.h.in htslib-1.9/configure ➜ Tools git:(master) ✗ cd htslib-1.9 ➜ htslib-...

    2018 days ago

  • Installing Platypus on Ubuntu !

    ..., done. (py27) ➜ Tools git:(master) ✗ cd Platypus (py27) ➜ Platypus git:(master) ls Dockerfile extensions L...u1) ... ➜ htslib-1.9 git:(master) ✗ make install zsh: correct...] Error 1 ➜ htslib-1.9 git:(master) ✗ sudo make install [sudo]...

    2018 days ago

  • Sync github repo

    ...cal repo exactly like your remote repo. Remember to replace origin and master with the remote and branch th...want to synchronize with. git fetch origin git reset --hard origin/master git clean -f -d...

    1980 days ago

  • Install Zef for Raku !

    ...g cpan mirror: https://raw.githubusercontent.com/ugexe/Perl6-ecosystems/master/cpan1.json ===> Updated cpan mirror: https://raw.githubusercontent.com/ugexe/Perl6-ecosystems/master/cpan1.json ===> Updating p6c...

    1550 days ago

  • Create random 10000 SNPs in genome !

    (base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq SGDref.R64-2-1.dups.fa -snp_count 10000 -prefix simuSNP [Sun Jan 10 16:05:57 2021] Starting simuG .. [Sun Jan 10 1...

    1210 days ago

  • Create random 1000 INDEL in genome !

    (base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuSNP.simseq.genome.fa -indel_count 1000 -prefix simuINDEL [Sun Jan 10 16:14:00 2021] Starting simuG .. [Sun Jan...

    1210 days ago

  • Create random 1000 CNVs in genome !

    (base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuINDEL.simseq.genome.fa -cnv_count 100 -prefix simuCNV [Sun Jan 10 16:24:20 2021] Starting simuG .. [Sun Jan 10...

    1210 days ago

  • Create random 5 inversions in genome !

    (base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuCNV.simseq.genome.fa -inversion_count 5 -prefix simuINV [Sun Jan 10 16:30:40 2021] Starting simuG .. [Sun Jan...

    1210 days ago

  • Create random 2 translocations in genome !

    (base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuINV.simseq.genome.fa -translocation_count 2 -prefix simuTRANS [Sun Jan 10 17:12:58 2021] Starting simuG .. [Su...

    1210 days ago

  • Install wgd cli on linux !

    (JitMetaENV) ➜ wgd git:(master) pip install --user ERROR: You must give at l..."pip help install") (JitMetaENV) ➜ wgd git:(master) pip install --user . Proces...0 wgd-1.2 Then (JitMetaENV) ➜ wgd git:(master) export PATH=$PATH:/home/urbe...

    1206 days ago