phyloXML: XML for evolutionary biology and comparative genomics
phyloXML (example) is an XML language designed to describe phylogenetic trees (or networks) and associated data. PhyloXML provides elements for commonly...1607 days ago
Machine learning training and courses in bioinformatics !
Machine learning techniques have been successful in analyzing biological data because o...v models, and Bayesian networks) for biological sequence analysis and systems biology. Other machine learning techn...1584 days ago
1551 days ago
1544 days ago
1415 days ago
GROMACS: a versatile package to perform molecular dynamics
GROMACS is a versatile package to perform molecular dynamics, i.e simulate the Newtonian equations of motion for systems with...cleic acids. The WeNMR GROMACS web portal combines the versatility of this molecul...1365 days ago
1348 days ago
vsFilt: A tool to improve virtual screening by structural filtration of docking poses
The vsFilt is the first open application for post-docking structural filtration, available as a web-server. The new t...to detect a wide range of interaction types that are known to be involved in molecul...1254 days ago
Genome assembly training tutorial at Galaxy !
In this tutorial we assemble and annotate the genome of E. coli strain C-1. This strain is routinely used in experimental evolution studies involving bacteriophages. Fo...1222 days ago
Introduction to Bioinformatics and Computational Biology
This is the course material for STAT115/215 BIO/BST282 at Harvard University. Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue Ming T...1193 days ago