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List of bioinformatics workflow management tools !
Here are list of Workflow Managers BigDataScript – A cross-system scripting language for working with big data pipelines in computer systems of dif...1153 days ago
Tools to detect synteny blocks regions among multiple genomes
...d the mechanism and importance of all these regions (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2675965/)...nes gain and loss in ancient synteny blocks. SyDiG (http://www.ncbi.nlm.nih.gov/pubmed/21441096) Uncover...2620 days ago
Next Generation Sequencing (NGS) Tutorials
...ead annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing data. http://www.ncbi.nlm.nih.gov/pubmed/23657089 GATK: a...3498 days ago
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Atlas of ancient inter-ethnic group !!!
...ovide a deeper understanding of human history. Reference: http://www.sciencemag.org/content/early/2014/01/28/science.1245938 http://www.ncbi.nlm.nih.gov/pubmed/21390129?dopt=Abst...3743 days ago
La Trobe University, Melbourne, Australia
...n the Exosome, Secretome and Systems Biology laboratory of Dr Suresh Mathivanan. This position is funded through the National Institutes of Health (NIH) USA, to study the role of ex...3890 days ago
Postdoctoral Fellowship in Bioinformatics and Evolutionary Genomics
...bmit a curriculum vitae, a detailed letter of interest, and the names of three potential referees to Dr. Baxevanis at andy@mail.nih.gov. About Our Organization The NIH Intramural Research Program i...3332 days ago
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Computational Biology in the 21st Century: Making Sense out of Massive Data
...hallenges in sequencing, medical genomics and biological networks. The NIH Wednesday Afternoon Lecture S.... Bonnie Berger Runtime: 00:58:06 Permanent link: http://videocast.nih.gov/launch.asp?175633912 days ago
Translational Bioinformatics: Transforming 300 Billion Points of Data
..., and evaluating patients presenting with whole genomes sequenced. The NIH Wednesday Afternoon Lecture S...n the biomedical sciences worldwide. For more information, visit: The NIH Director's Wednesday Afternoo...3921 days ago
Python script to download covid genome !
...isaid.org/ has more (1200?), but they require you to sign up import requests import yaml seqs = yaml.load(requests.get("https://www.ncbi.nlm.nih.gov/core/assets/genbank/files...1146 days ago
Install BLAST in Ubuntu/Linux and Window !
...onda blast #Windows installation First: Download ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/...#If that FTP links does not work, try HTTP instead http://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/...1157 days ago
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Comment on "Basic command-line to run BLAST"
Detail tutorial here https://www.ncbi.nlm.nih.gov/books/NBK279684/632 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
(base) [jnarayan@hn1 TOOLS]$ curl -o datasets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LA...25k(base) [jnarayan@hn1 TOOLS]$ curl -o dataformat 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line...891 days ago