AMStat: display statistics of large sequence files from next generation sequencing projects
SAMStat is an efficient C program to quickly display statistics of large sequence files from next generation sequencing projects. When applied to SAM/BAM files all statistics are reported for unmapped, poorly and accurately mapped reads separately. This allows for identification of a va...Tags: display, statistics, large, sequence, next, generation, sequencing, projects, NGS, SAMstats
2142 days ago
Error: Could not find dictionary next to reference file file
htsjdk.samtools.SAMException: Could not find dictionary next to reference file file:///data/sata_data/workshop/wsu29/Parivartan/snakemake_germline_legacy/references/GRCh38.primary_assembly.genome.faTags: dictionary, next, reference, file, samtools, SAMException
1683 days ago
Tags: McClintock, Meta-pipeline, identify, transposable, element, insertions, next, generation, sequencing, data
1425 days ago