Results for "Open Source"

Blogs

  • Install ImageMagick from Unix Source

    ...ing for gcc option to support OpenMP... -fopenmpchecking for pthread_join us...for poll... yeschecking for popen... yeschecking for _popen... no...w/api/MagickCore/threshold_8h-source.html /usr/local/share/doc/Ima.../www/api/MagickWand/ftv2folderopen.png /usr/local/share/doc/ImageM...

    2147 days ago

  • List of motif discovery tools !

    ...ELM -- Eukarotic Linear Motif Resource Predict functional sites i...Integrating protein annotation resources through the Distributed Anno...PhosphoSite -- A bioinformatics resource dedicated to physiological pr...wn structures. ProMateus--an open research approach to protein-bi...

    1995 days ago

  • AWK for beginners !

    AWK is a standard tool on every POSIX-compliant UNIX system. It’s like flex/lex, from the command-line, perf...1, 2, 3); # AWK doesn't have file handles, per se. It will automatically open a...

    1837 days ago

  • New Machine Learning Packages in R

    Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras, an open source software library for automated machine learning. See README for an example....

    1501 days ago

  • Protocol for De novo Genome Assembly using Illumina Reads

    In this protocol, we address and describe...ssembly. No previous knowledge of the source DNA sequence length, structur...extgengenomics/ingap and http://ingap.sourceforge.net/inGAP is also useful...s:Artemis - http://www.sanger.ac.uk/resources/software/artemis/IGV - http:...

    1206 days ago

  • Run bash script in Perl program !

    ...for example, in the development of source codes, standalone software/...ose between them.   1. IPC::Open2 More at https://bioinformat...ne.com/snippets/view/42919/perl-ipcopen2-module 2. exec”&rdquo...it more in the documentation: IPC::Open3. $output = open3(my $o ut,&nb...

    639 days ago

  • Ancient whole genome duplication (WGD) detection tools !

    There are two methods for ancient WGD detection, one is collinearity analysis, and the...is selected, because i-adhore depends on mpich. If openmpi is installed, an error wil...loading shared libraries: libmpi_cxx.so.40: cannot open s...

    1157 days ago

  • Frequently used bioinformatics tools for viral genome analysis !

    IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J, Ferns B, Goulder P, Nastoul...D. E. & Salzberg, S. L. Genome Biol. 15, R46 (2014). MUMmer: Versatile and open s...

    1048 days ago

  • Levenshtein and Damerau-Levenshtein distance !

    Levenshtein Distance Also known as Edit Distance, it is...sertions, or substitutions) required to transform a source string into the target one. F...e, if the target term is “book” and the source is “back”, you wi...

    952 days ago

  • Installing ELGG on Ubuntu !

    Elgg is an open-source and highly customizable framework used for building an online social environment. It pr...systemctl restart apache2 Step 6 – Access Elgg Web Interface Now, open your web browser...

    713 days ago