Install ImageMagick from Unix Source
...ing for gcc option to support OpenMP... -fopenmpchecking for pthread_join us...for poll... yeschecking for popen... yeschecking for _popen... no...w/api/MagickCore/threshold_8h-source.html /usr/local/share/doc/Ima.../www/api/MagickWand/ftv2folderopen.png /usr/local/share/doc/ImageM...2147 days ago
List of motif discovery tools !
...ELM -- Eukarotic Linear Motif Resource Predict functional sites i...Integrating protein annotation resources through the Distributed Anno...PhosphoSite -- A bioinformatics resource dedicated to physiological pr...wn structures. ProMateus--an open research approach to protein-bi...1995 days ago
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New Machine Learning Packages in R
Machine Learning autokeras v1.0.1: Implements an interface to AutoKeras, an open source software library for automated machine learning. See README for an example....1501 days ago
Protocol for De novo Genome Assembly using Illumina Reads
In this protocol, we address and describe...ssembly. No previous knowledge of the source DNA sequence length, structur...extgengenomics/ingap and http://ingap.sourceforge.net/inGAP is also useful...s:Artemis - http://www.sanger.ac.uk/resources/software/artemis/IGV - http:...1206 days ago
Run bash script in Perl program !
...for example, in the development of source codes, standalone software/...ose between them. 1. IPC::Open2 More at https://bioinformat...ne.com/snippets/view/42919/perl-ipcopen2-module 2. exec”&rdquo...it more in the documentation: IPC::Open3. $output = open3(my $o ut,&nb...639 days ago
Ancient whole genome duplication (WGD) detection tools !
There are two methods for ancient WGD detection, one is collinearity analysis, and the...is selected, because i-adhore depends on mpich. If openmpi is installed, an error wil...loading shared libraries: libmpi_cxx.so.40: cannot open s...1157 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J, Ferns B, Goulder P, Nastoul...D. E. & Salzberg, S. L. Genome Biol. 15, R46 (2014). MUMmer: Versatile and open s...1048 days ago
Levenshtein and Damerau-Levenshtein distance !
Levenshtein Distance Also known as Edit Distance, it is...sertions, or substitutions) required to transform a source string into the target one. F...e, if the target term is “book” and the source is “back”, you wi...952 days ago
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