Hawkeye: an interactive visual analytics tool for genome assemblies
...and are guided by a ranking component towards likely mis-assemblies. Hawkeye is freely available and released as part of the open source AMOS project http://amos.sourceforge.net/hawkeye. https://ge...1954 days ago
GenoViz: Visualization software for genomics
GenoViz provides software applications and re-usable com...information about IGB, visit http://bioviz.org.Source code for the project was host...nelab/integrated-genome-browser. We are still using SourceForge to distribute new releas...1953 days ago
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Genome assembly forensics: finding the elusive mis-assembly
...bly errors in both draft and finished genomes. The software described is compatible with common assembly formats and is released, open-source, at http://amos.sourceforge.net. https://www.ncbi.n...1929 days ago
UpSetR: An R Package for the Visualization of Intersecting Sets and their Properties
UpSetR generates static UpSet plots. The UpSet technique visualizes set in...Set website. You can also check out the UpSetR shiny app. Here is the source code for the shiny wrapp...1927 days ago
plumber:An R package that converts your existing R code to a web API
plumber allows you to create a REST API by merely decorating your existing R source code with special comments. Take...1883 days ago
HumCFS: a database of fragile sites in human chromosomes
Fragile sites are specific chromosomal region that exhibit an increased frequency of...vides comprehensive information about experimentally identified CFS at a single source. https://link.springer.com/e...1844 days ago
TRITEX sequence assembly pipeline for Triticeae genomes
The pipeline is open-source and hosted in a public Bitbucket repository. TRITEX has been run on highly inbred genotypes of barley (Hordeum vulgare), tetraploid wheat (...1723 days ago