Results for "Open Source Codes"
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IUPAC codes DNA: Nucleotide Code: Base: ---------------- ----- A.................Adenine C.................Cytosine G.................Guanine T (or U)..........Thy...2258 days ago
Creating conda environment for python2.7
TIP: By default, environments are installed into the envs&n...ptools-39.1.0 | py27_0 582 KB openssl-1.0.2o | h20670df_0 3.4 MB...0_3 ncurses: 6.0-h9df7e31_2 openssl: 1.0.2o-h20670df_0 pip: 10.0...this environment, use:# > source activate py27## To deactivate...ctive environment, use:# > sourc...2203 days ago
Learning Python Programming - a bioinformatician perspective !
Python Programming is a general purpose programming language that is open source, flexible, powerful and easy to use. One of the most important features of python is its rich set of utili...2196 days ago
Ancestral sequence reconstruction steps !
Ancestral sequence reconstruction (ASR) – also known as ancestral gene/sequence reconstruction/resu...? 1- Alignments "Mafft - http://mafft.cbrc.jp/alignment/software/sourc...2192 days ago
My commonly used commands in Bioinformatics
FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so...raised in this issue. So as far as I'm concerned, you can close this issue (or keep it open...2123 days ago
Parallel Processing with Perl !
Here is a small tutorial on how to make best use of multiple processors for bioinformatics...buffering. You can lock the file using flock command. open (...your_file.fasta” “file_name”`; step2: open...2093 days ago
- It's been a while since I last installed BLAT and when I went to the downl...t going, so I decided to download the source code and compile that.I will...d the README file that comes with the source code.One thing about building...te the directory lib/$MACHTYPE in the sourc...
2076 days ago
- Elgg is an open source social networking engine that allows the creation of social environments such as campus social networks and internal collaborative platforms for...
619 days ago
Steps to find all the repeats in the genome !
To find repeats in a genome from 2 to 9 length using a Perl script, you can use the RepeatMasker tool with the "-...can help you parse RepeatMasker output files[0]. You can download it from the sourc...261 days ago
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