Results for "Open-source"
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological programmer or bioinformaticia...3964 days ago
Five points for bioinformatics software/tools
...up the pipeline; you can also find this kind of request on any QA forum. I personally believe this coding horror brings the biggest downside of open-source programs; where you need some...3721 days ago
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Bookmarks
Sequencing Solutions to World Health
"New technology that quickly, easily and economically reveals the genomes of viruses and pathogens transforms public health and medicine." Source: Life technologies3915 days ago
Should you get sequenced? Not all bad genes predict disease
“What we really don’t know yet is whether the predictive aspects of the genome are going to turn out to be beneficial or potentially harmful” “As...3915 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable knowled...3958 days ago
- Protein is a part of every cell in your body, and no other nutrient plays as many different roles in keeping you alive and healthy. Protein is the building block of our b...
3567 days ago
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Discussion topics
- The key to finding a solution is to notice that most genomicsequences differ by very little. It may well be that the number of complete genome sequences being stored...
3933 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it comes with a genuinely useful standard library that can...3961 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby pro...3961 days ago
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Top-level pages
- "Bioinformatics is a science of biological predictions and analysis" -- Jitendra Narayan "The mathematical, statistical and computing methods that aim to solve biol...
3961 days ago
Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Evidence from morphological, biochemical, and gene sequence data sug...3960 days ago
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Wire posts
News
- "In recently published paper (entitled "Microbial Production of Short-chain Alkanes") in Nature journal on September 29, a group of genius Korean researchers led by Disti...
3883 days ago
NGS course Medical Genomics, scheduled for 17-20 September 2013 in UZ Leuven (Belgium).
This course is open to all students and postdocs and registration for all academic participants is free of charge. To help us in organizing the course, please register on...3932 days ago
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Opportunity posts
CSIR-INSTITUTE OF GENOMICS & INTEGRATIVE BIOLOGY
CSIR-INSTITUTE OF GENOMICS & INTEGRATIVE BIOLOGY, Mall Road, Delhi 110007 POSITIONS OPEN FOR TEMPORARY RESEARCH PROJECT POSTS (Date of interview 23rd September...3916 days ago
Research Project Posts for CSIR Project, Delhi
Positions Open For Temporary Research Project Posts for CSIR Project, Delhi CSIR is looking for bright young candidates to get involved in building algorithms and platfo...3918 days ago
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ResearchLabs posts
Donnelly Centre of Cellular & Biomolecular Research (CCBR), Bader Lab
...rofiles. We are interested to find how these links are rewired by mutations to cause disease. This work is supported through the development of open-source biological pathway and networ...3961 days ago
- Raghava's group is known for developing open source software or web servers. Group have developed large number of web-based services. Find more at http://www.imtech.res.in/raghava/
3686 days ago
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Fun
Perl Poem: Parse it in both Perl and English!
Larry's, er, corpus has fortunately been overshadowed by that of the reigning Perl Poet, Sharon Hopkins. She has written quite a few Perl poems, as well as a paper on Per...3932 days ago
Bioinformatician special skills !!
Bioinformatician and Computational biologist are the only programmers on Earth who can explain multiplication and division are the same. Pretty codes for them ... /([...3909 days ago
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Video
Genetics for Fun and Profit: Andrew Hessel at TEDxVilnius
Andrew Hessel co-chairs the Bioinformatics and Biotechnology track at the Singularity University, an institution founded by futurist Ray Kurzweil and X Prize Foundation C...3912 days ago
Mathematics for Computing : Huffman Code (Tree Approach)
Determining a Huffman code for a discrete memoryless source, using the Huffman Tree algorithm3893 days ago
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Bio-Scripts
- # To follow these instructions, we'll assume your system admins have already installed these essentials: # Debian/Ubuntu system admins should run: sudo apt-get install...
2158 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import r...1150 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at TUBITAK MAM Research Center. His research interest...2375 days ago
Groups
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provides analytical and statistical routines, parsers for common fil...3917 days ago
R is a free software programming language and a software environment for statistical computing and graphics. The R language is widely used among statisticians and data mi...3964 days ago
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Tags
- scikit-bio is currently in beta. We are very actively developing it, and backward-incompatible interface changes can and will arise. To avoid these types of changes being a surprise to our users, our public APIs are decorated to make it clear to users when an API can be relied upon (stable) ...
Tags: scikit-bio, open-source, python, package, algorithms, educational, resources, bioinformatics
2270 days ago
- It groups containers that make up an application into logical units for easy management and discovery. Kubernetes builds upon 15 years of experience of running production workloads at Google, combined with best-of-breed ideas and practices from the community.
Tags: Kubernetes, open-source, system, automating, deployment, scaling, management, containerized, applications.
1550 days ago
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Comments
- ...th different error rates, read lengths, and insert sizes. The ART is open-source and available for free downlo...ad lengths, error rates, and coverage levels. The wgsim tool is also open-source and available for free downlo...
429 days ago
Comment on "Short-read assembly using Spades !"
SPAdes (St. Petersburg genome assembler) is a popular tool for short-read assembly. It can assemble reads generated from Illumina, IonTorrent, PacBio,...434 days ago
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