HapCUT2: robust and accurate haplotype assembly for diverse sequencing technologies
HapCUT2 is a maximum-likelihood-based tool for assembling haplotypes from DNA sequence...nly. VCF input should contain diploid variants. If you use HapCUT2 in your research, please cite: Edge, P., Ba...2193 days ago
chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
Provides interactive, configurable and elegant graphics visualization of the chromosome...colors which can be highly advantageous in the scientific interpretations and research work. The package provide mul...1861 days ago
SOAP2 : Short Oligonucleotide Analysis Package 2
SOAPaligner/soap2 is a member of the SOAP (Short Oligonucleotide Analysis Package). It...s and the indexing data structures (2way-BWT) are developed by the algorithms research group of the Department of Co...2185 days ago
Instructions for Creating Your Own R Package
The following is a step-by-step guide to creating your own R package. Even beyond...course, youmay find this useful for storing functions you create for your own research or for editing existingR pack...1548 days ago
2080 days ago
BioGPS: Spotlight on the Gene Expression Atlas
BioGPS opened 2016 with a publication in Nucleic Acids Research, right after the New Year holiday. Throughout the year, new designs for the site were being created, reviewed, adjusted, reviewed, a...2037 days ago
SKESA: strategic k-mer extension for scrupulous assemblies
SKESA is a DeBruijn graph-based de-novo assembler designed for assembling reads of micr...or SKESA is freely available at https://github.com/ncbi/SKESA/releases. Research Paper @ Link SKESA algo...2010 days ago
1978 days ago
1963 days ago
EXCAVATOR: detecting copy number variants from whole-exome sequencing data
EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing...for the investigation of CNVs in largescale projects, as well as in clinical research and diagnostics. EXCAVATOR is...1959 days ago