Results for "PERL"
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TULIP - The Uncorrected Long read Itegration Pipeline
#Running TULIP (The Uncorrected Long-read Integration Process), version 0.4 late 2016 (European eel) TULIP currently consists of to Perl scripts, tulipseed.perl and tulipbulb.perl. These are ve...2351 days ago
- Synteny Imaging tool (Synima) written in Perl, which uses the graphical features of R. Synima takes orthologues computed from reciprocal best BLAST hits or OrthoMCL, and DAGchainer,...
2334 days ago
Building Web UIs With Mojolicious Perl
...ne of 3 leading web frameworks available in the perl ecosystem (along with Dancer...Gantry - Web application framework for mod_perl, cgi, etc. Kossy - A We...An all in one framework. Poet - a modern Perl web framework for Mason devel...2318 days ago
Frontend: Perl Web framework documentation - Andrej Sali Lab
The frontend is a set of Perl classes that displays the web interface, allowing a user to upload their input files, start a job, display a list of all jobs in the system, and get...2305 days ago
mojolicious: a next generation web framework for the Perl programming language.
...early days of the web, many people learned Perl because of a wonderful Perl library called CGI. It w...ox with RESTful routes, plugins, commands, Perl-ish templates, content negoti...y clean, portable and object-oriented pure-Perl API with no hidden magic and...2301 days ago
Circoletto: visualizing sequence similarity with Circos
...g and informative overview of sequence similarity search results. Online version and downloadable software package for offline use (source code in PERL) freely available at htt...2273 days ago
“One code to find them all”: a perl tool to conveniently parse RepeatMasker output files
One code to find them all is a set of perl scripts to extract useful information from RepeatMasker about transposable elements, retrieve their sequences and get some quantitative inf...2159 days ago
RestrictionDigest: A powerful Perl module for simulating genomic restriction digests
RestrictionDigest can simulate the reference genome digestion and generate comprehensive information of the simulation. It can simulate single-enzyme digestion, double...2150 days ago
TULIP - The Uncorrected Long read Integration Pipeline
TULIP currently consists of two Perl scripts, tulipseed.perl and tulipbulb.perl. These are very much intended as prototypes, and additional components and/or implementations are likely to follow...2178 days ago
bpRNA: large-scale automated annotation and analysis of RNA secondary structure
...eudoknots, along with the positions, sequence, and flanking base pairs of each such structural feature. The bpRNA code is written in perl and requires the Graph perl module. Several additional sc...2171 days ago
