Linux Sort Commands for Bioinformatics
...first column, then the second if the first is the same, and so on:sort input.txt sort a huge file (GNU sort ONLY):sort -S 1500M -t $HOME/tmp input.txt > sorted.txt sort st...3635 days ago
Monitor running jobs on Linux server
...are logged in, and the short/medium/long-term compute load on the machine. If you...you really are the only one using this machine.Cpu(s): 0.0%us, 0.0%s...; PR NI VIRT RES SHR S %CPU %MEM TIME+&...3629 days ago
A guide for complete R beginners :- R Syntax
R is a functional based language, the inputs to a function, including options, are in brackets. Note that all dat and options are separated by a comma Function(data, options)...3366 days ago
A guide for complete R beginners :- Getting data into R
...by typing its name; x will produce the output ‘[1] 1 2 3 4 5′...Friday’); Usually however you want to input from a file. We have touched...Note Nothing will appear on screen, the output is going to the file Also i...3366 days ago
A guide for complete R beginners :- Installing R packages
Part of the reason R has become so popular is the vast array of packages available at the cran and bioconductor repositories. In the last few years, the number of packages has grown...3366 days ago
Genome Assembly Tools and Software - PART2 !!
...ile of quality-value as the input. Since the quality-value file for the high throughput short reads is usually highl...eads. CGAL 0.9.6b – Computing Genome Assembly Likelihoo...for merging assemblies. PhrapUMD 2 – Modified version...2694 days ago
Awesome perl frameworks, libraries and software - PART 2
...ST. book/HTTP-Proxy - A pure Perl HTTP proxy bingos/dev...sp;- Perl scripts for several purpose vlet/iec104 - Perl...iversity/nagios-nrpe - A pure perl implementation of the...itten in Perl. shadowcat-mst/pumpkin-perl-staging - Stag...2502 days ago
Awesome perl frameworks, libraries and software - PART 3
...nsions of images in several popular formats perigrin/flexo-bo...Perl) run a subprocess with input/ouput redirection rjbs/Emai...marschke/nagios-nrpe - A pure perl implementation of the..., add, and clear arbitrary output headers swcarpentry/bc ...2502 days ago
Awesome perl frameworks, libraries and software - PART 4
...- reengineered SmokePing, using Extopus as its frontend nekokak/p5-...eak which can load FLEX dynamiclly punchdrunker/iOSEmoji - inf...pper around make to colorize the output. manuelkasper/AS-Stats ...t/india-election-data - To map publicly available datasets rela...2502 days ago
Awesome perl frameworks, libraries and software - PART 5
...repo (e.g. nqp-rx one or Rakudo one) at some point. jasonhancock/nagios-puppetdb - Nagios plugins and pnp4nagios templates related to Puppetlab's PuppetDB project. g...2502 days ago