Results for "PYthon"
Top-level pages
List of bioinformatics open source projects/software.
...services BioPerl http://www.bioperl.org/wiki/Main_Page Perl language toolkit BioPHP http://www.biophp.org/ PHP language toolkit Biopython http://biopython.org/wiki/Main_Page Python la...3755 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...nditions http://www.unil.ch/dee/page36926_fr.htmlEggLib EggLib is a C++/Python library and program package f...nd Phenotype Data in Pedigrees http://watson.hgen.pitt.edu/FFPopSim C++/Python library for population geneti...3735 days ago
List of In-silico Binding Site Prediction Tools
...eloped by Arthur Olson’s group at The Scripps Research Insitute) or the SiteHound-web server can be used to produce Affinity maps or MIFs. A python script named 'auto.py' is pro...3742 days ago
Commercial and public next-gen-seq (NGS) software
...- A visual tool for analyzing cross_match alignments. Developed by Rene Warren and Steven Jones at Canada's Michael Smith Genome Sciences Centre. Python/Win or Linux. Counting e.g....3517 days ago
- Subprocess is one of simplest way of running linux command from within python code Example: if you want to run fastqc for QC of fastq file: from subprocess import Popen,PIPE,call...
3547 days ago
Using Interval Trees to Query Genome Annotations by Position
...work on query related to overlapping genomic features: use IntervalTree python pkg http://informatics.malar...ery-genome-annotations-by-position/ http://hackmap.blogspot.de/2008/11/python-interval-tree.html http://en...3547 days ago
Software packages for next gen sequence analysis
...- A visual tool for analyzing cross_match alignments. Developed by Rene Warren and Steven Jones at Canada's Michael Smith Genome Sciences Centre. Python/Win or Linux. Counting e.g....3241 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ess than a minute to run an analysis REST and Python API to mange large projects....selected loci in bacterial genome, written in Python and C Input: FASTQ referenc...etection in tumor/normal samples; dependent on python, bamtools, boost, and LAPACK...2907 days ago
Genome Assembly Tools and Software - PART1 !!
...fficient Assembly of Genome-wide Physical Maps The purpose of this Python module is help scientists use...equence. Scaffold_builder is an advanced wrapper for Nucmer, written in Python that resolves several situati...2684 days ago
Awesome perl frameworks, libraries and software - PART 1
..., types, compilable, company friendly, security kbh3rd/shptosvg - Shapefile to SVG renderer in Perl famzah/langs-performance - C++ vs. Python vs. Perl vs. PHP vs. Java vs....2487 days ago
