RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipulation pipe...2920 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing stages - known as 'pipelines'...2919 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to t...(cd) to the linuxTutorial folder, and do all the processing inside: [uzi@quince-srv2 ~/]...and advanced tutorials such as Illumina Amplicons Processing Workflow. In Linux, we use a...2888 days ago
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VirtualFlow: a versatile, parallel workflow platform for carrying out virtual screening
related tasks on Linux-based computer clusters of any type and size which are managed by a batchsystem (s...gs They use the same core technology regarding the workflow management and paralleliz...1435 days ago
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BIMA V3: an aligner customized for mate pair library sequencing
Summary: Mate pair library sequencing is an effective and economical method for detect...0 times faster and 25% more accurate than popular NGS alignment programs when processing mate pair sequencing. Availab...2712 days ago
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene or ...fsson, Jase Gehring & Lior Pachter† Modular and efficient pre-processing of single-cell RNA-seq, Natur...1139 days ago