Results for "Pilon"
Blogs
List of tools frequently used while genome assembly
...minimap (v. 0.2-r124-dirty) bwa (v. 0.7.12-r1039) I have used the following polishing tools Racon (v. not available) Pilon (v. 1.18) Nanopolish&nb...1923 days ago
Software for genome assembly !
.../github.com/Gabaldonlab/redundans 7 Arrow error correction https://github.com/PacificBiosciences/ GenomicConsensus 8 PILON error correction https://github.com/broadinstitute/pilon/wiki 9 BUSCO single copy gen...1337 days ago
Bookmarks
- Pilon is a software tool which can be used...s, including large event detection Pilon requires as input a FASTA fil...eads aligned to the input FASTA file. Pilon uses read alignment analysis...at https://github.com/broadinstitute/pilon/wiki...
3002 days ago
ONT assembly and Illumina polishing pipeline
...p a paired-end Illumina dataset onto the contigs obtained in the previous steps using BWA mem. Perform correction of contigs using pilon and the Illumina dataset...2348 days ago
- +1 more Bookmarks
Top-level pages
Genome Assembly Tools and Software - PART1 !!
...show that KmerGenie’s choices lead to assemblies that are close to the best possible over all k-mer lengths. pilon v1.16 – Automated Assembly Improvement pilon uses read alignment analysis...2679 days ago
Wire posts
