Best practices in bioinformatics training for life scientists
Among life scientists, from clinicians to environmental researchers, a common theme is the need not just to use, and gain familiarity with, bioinformatics tools and reso...3925 days ago
2755 days ago
HapCUT2: robust and accurate haplotype assembly for diverse sequencing technologies
...binations of the above technologies (e.g. scaffold long reads with Hi-C reads) See below for specific examples of command line options and best practices for some of these technologie...2190 days ago
1544 days ago
Snakemake workflow: dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow for calling small genomic variants.1754 days ago
Best Practices for Variant Calling with the GATK
The presentations below were filmed during the March 2015 GATK Workshop, part of the BroadE Workshop series. At the time of this workshop, the current version of Broad&r...1542 days ago
992 days ago
A guide to machine learning for biologists
...olving deep neural networks. We describe how different techniques may be suited to specific types of biological data, and also discuss some best practices and points to consider when o...971 days ago