AMStat: display statistics of large sequence files from next generation sequencing projects
...bsp;files all statistics are reported for unmapped, poorly and accurately mapped reads separately. This allows for identification of a variety of problems, such as remaining linker and...2016 days ago
DISTRUCT: a program for the graphical display of population structure
...g the data that are represented in the Central/South Asia K=5 plot in Science 298: 2381-2385 (2002). Please send comments or problems with distruct to No...1880 days ago
Patterns: a modeling tool dedicated to biological network modeling
It is designed to work with patterned data. Famous examples of problems related to patterned data are: recovering signals in networks after a stimulation (cascade network reverse engineering), analysing periodic signals.1757 days ago
CLARK: Fast, accurate and versatile sequence classification system
CLARK, a method based on a supervised sequence classification using discriminative k-mers. Considering two distinct specific classification problems (see the article for details),...1553 days ago
Dahak: benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
...the analytical framework as a robust and reliable containerized workflow system, which will be free from dependency, installation, and execution problems typically associated with oth...1499 days ago
IRscope: an online program to visualize the junction sites of chloroplast genomes
eMPRess, a software program for phylogenetic tree reconciliation under the duplication-transfer-loss model that systematically addresses the problems of choosing event costs and selecting representative solutions, enabling users to make more robust inferences.1268 days ago
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