Results for "Programming with Perl"

Files

  • Regular Expression Cheat Sheet

    The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user friendly regu...

    3953 days ago

  • Detect the sequence pattern and its location in fasta file with match and mismatches information.

    This script is one of my old script to detect some centromeric pattern in chromosomes. User can also control the number of mismatches allowed through command line .. To run: perl centro.pl

    3868 days ago

  • Clean the FASTA file

    Mostly FASTA file contain NNN characters, which can be replace by random A T G C character with this perl script. It also print the FASTA sequence name, N's counts, nucleotide count and percentage details at command prompt/standard output.  

    3866 days ago

  • Applied Statistics for Bioinformatics using R

    The purpose of this book is to give an introduction into statistics in order to solve some p...as to test biological hypotheses. The book intends to be introductory in explaining and prog...

    2076 days ago

  • analyzing codon usage

    perl script analyzing codon usage in an input sequence to evaluate how efficiently it will be expressed in Anopheles gambiae. The input codon usage table derived from highly‐expressed A. gambiae genes is appended below.

    1641 days ago

  • Prepare for Coding Interview !

    This is a comprehensive guide to prepare for your next coding interview. It's...t include the latest developments in programming since 2019, it nails the core...cessible way!Credits to Kaiyu Zhang, with additional material in the ap...ees and Graph algorithms 3. Dynamic Prog...

    845 days ago