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Computational Proteomics : Lets remember the basics
I spend some of my valuable time in computational drug designing sector. I remember my initial proteomics days, playing with interactive protein visualization software and dreaming bi...3488 days ago
List of gene ontology software and tools
...TOME pathways, and TRANSFAC motifs to a user-specified group of genes, proteins or microarray probes. g:GOSt...of experimental data. MetaCore is based on a curated database of human protein-protein, protein-DNA interact...3710 days ago
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Master Thesis: Trans-membrane topology prediction through Markov based decoders
...uctural information on alpha helical membrane protein (MPs) has hindered thus far t...r automatic prediction of trans-membrane (TM) protein structure. While algorithm fo...of the sequences in a standard dataset of 86 proteins with supervised topology. Th...3945 days ago
3554 days ago
how could be a molecular dynamics be helpful studying the protein's conformation
give your views3489 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project provides...3948 days ago
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Vaccination can be dangerous sometimes !!!
...und the cap and the stem of that virus’s haemagglutinin. But some of those antibodies also targeted the stem of H1N1’s haemagglutinin protein, helping that virus fuse to c...3895 days ago
DNA Bending Propensity in the Presence of Base Mismatches: Implications for DNA Repair
...y and molecular biology at Michigan State University. Feig studies the proteins MutS and MSH2-MSH6, which re...defective DNA and initiate DNA repair. Natural DNA repair occurs when proteins like MutS (the primary prote...3912 days ago
Structural polymorphism analysis from NGS data
...improving the adaptive capacity of agroecosystems it will be critical to establish a link between sequence variation, functional variation, gene/protein expression and phenotypic ada...3949 days ago
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The Centre for Bioinformatics (MCB) Lab
...d computational methods for the analysis of this data in breast cancer. We have worked on probabilistic models for subcellular localization, protein-protein interactions, and problems re...3948 days ago
The Best Bioinformatics / Computational Biology Quotes
...te chromosome ! Be nice to the BioGeek, for all you know they might be the next curator! Beware of computational biologist they screw genes and protein. Warning! Your genome is ful...3721 days ago
3909 days ago
Computer Theory & Genetics: George Chao at TEDxUMNSalon
...le disciplines as well as in Japan. Some of these researches include developmental genetics in Drosophila, computational techniques for analyzing protein interactions, and helping wit...3916 days ago
Parse a genbank file using regular expressions
...$cds_end = $4; print "CDS: $cds_start - $cds_end\n"; } elsif (/(\/translation=")(.*)/) { # protein product begins print "Translation: "; $protein = $2; $trans = 1;...2917 days ago
Retrieve NCBI GenBank records with a range of accession numbers
#!/usr/bin/perl #FILE: ncbi_search.pl #AUTH: Paul Stothard (paul.stothard@gmail.com) use warnings; use strict; use Getopt::Long; use LWP::Simple; use URI::Es...2916 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...anning kit based on this profile. Alterations in the gene, transcript, protein, and metabolite profiles betw...r was predicting the interaction between the prokaryotic two-component proteins. To be able to accurately pr...2363 days ago
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Comment on "Tools for Sequence translation !"
...a DNA or RNA sequence into its corresponding protein sequence. This is an importan...anslate a DNA sequence into its corresponding protein sequence. It supports several...perform reverse translation (i.e., convert a protein sequence into its correspondi...421 days ago
Comment on "FRODOCK 2.0: fast protein–protein docking server"
A web applet for browsing protein-protein interactions was implemented. It enables the display of interaction relationships, based upon neighboring distance and biological function. Availability: The Java applet is available at http://www.charite.de/bioinformatics1384 days ago