BioRuby :Ruby packages for biologist
...grated environment in bioinformatics for the Ruby language. This project is supported by University of Tokyo (Human Genome Center), Kyoto University(Bioinformatics Center) and the Open Bio Foundation....3962 days ago
Check Linux server configuration !!
...bsp; : 6model : 15model name : Intel(R) Xeon(R) CPU &n...3667 days ago
A guide for complete R beginners :- Getting data into R
...of vertical columns with the option, breaks=50 (or another relevant number). boxplot(mydata) We can...e file Also it may not be saved immediately but will once the device (or R) is turned quit. To quit R...3372 days ago
A guide for complete R beginners :- Installing R packages
...profile: Setting UK repositoryn")r = getOption("repos") # hard code the UK repo for CRANr["CRAN"] = "http://cran.uk.r-project.org"options(repos = r)rm(r) I found this tip in a stacko...3372 days ago
3284 days ago
Frequent words problem solution by Perl
...rn: All most frequent k-mers in Text (in any order).use strict;use warnings;my $s...sp; my $km=kmerMatch ($string, $myStr, $kmer); if ($km &g...mers with sliding windowmy ($string, $myStr, $kmer)=@_;my $count=0;for (my $aa=0;...3267 days ago
Pattern Matching Problem Solution with Perl
...s a substring. Use 0-based indexing.use strict;use warnings;my $string="GATATATGCATATACTT";my $subStr="ATAT";my $kmer=length($subStr);kmerMatch ($string, $subStr, $kmer);sub kmerMatch { #Check the ex...3267 days ago
Genome Assembly Tools and Software - PART2 !!
...er for Brassicaceae SpeciesKGBassembler (Brassicaceae genome assembler) is a C++ based tool for assem...ectness of Genome AssembliesNN50-calculator (Normalized N50 calculator) is a tool for evaluating the...2700 days ago
Awesome perl frameworks, libraries and software - PART 2
...L checking patschbo/BaNG - Backup Next Generation for Linux & Mac (using rsync and btrfs snapshots, Web-Frontend, Statistics, History-Merger) NoodlesNZ/statsd-perl-mysql&...2509 days ago
Awesome perl frameworks, libraries and software - PART 3
...A pure-perl implementation of zabbix-sender. derf/Travel-Status-DE-IRIS - IRIS Perl API (German and partially european railway departure monitor) Debian/devscripts - Mir...2509 days ago