Results for "RNA Seq"
Blogs
Integrative RNA and ChIP-Seq analysis of regulatory T-cells
Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application n...T-helper cells. Learn how the gene expression profiles from RNA-Seq and FoxP3 DNA-protein binding sites from ChIP-Seq are integrated. For mor infor...3212 days ago
Integrated mRNA and microRNA transcriptome analysis in Strand NGS
Using a nasopharyngeal carcinoma case study, this paper highlights the integrated transcriptome analysis capabilities of Strand NGS demonstrating the identification of miRNA – mRNA...3212 days ago
Calling narrow and broad peaks from ChIP-Seq data
Know about the state-of-the-art algorithms implemented i...ions of histone modification (broad peaks) from ChIP-Seq data.Read the benchmarking st...udy on Calling narrow and broad peaks from ChIP-Seq data in Strand NGS by Rohit G...3212 days ago
Computer simulation of genetic mechanism !!
...ate synthetic next-generation sequencing data by mimicking real sequencing process with empirical...ct different isoforms and alternate splicing from RNA-Seq data....uk/projects/bargen/ kernalPop A spatially explici...ram for the simulation of DNA sequence evolution across a phylo...2990 days ago
Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
Live Webinar on RNA-Seq Data Analysis Abstract: Strand NGS supports an extensive...workflow for the analysis and visualization of RNA-Seq data. The workflow...ar will give an overview of the features in the RNA-Seq data analysis workflow in Str...2770 days ago
Important Journals, Blogs and Forums for Bioinformaticians
...ragt’s blog on biology, sequencing, bioinformatics, &hell...cibility, and programming. Enseqlopedia: James Hadfield’...in NGS data & analysis. RNA-Seq Blog: Transcriptome Resea...formatics forum Seqanswers - RNA-Seq forum BioStar BOL...2657 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
...able real-time device for DNA and RNA sequencing. Each consumable flow...nerate 10–20 Gb of DNA sequence data. Ultra-long re...rror-correction tool for nanopore sequence datahttps://github.com/j...riant-detection tool for nanopore sequence datahttps://github.com/m...2335 days ago
BBTools for bioinformatician !
...n mapping small reads (e.g. miRNA) When mapping small RNA's with BBMap use the followin...are set for relatively short sequences so if they are many meg...e, the quality values can alternately be set to allow errors to...will forcibly align a primer sequence (or a set of primer sequ...2285 days ago
- ...his https://github.com/trinityrnaseq/trinityrnaseq/releases/tag/Trinity-v2.6.6 ➜ cd trinityrnaseq-Trinity-v2.6.6 ➜ trinityr...tory '/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/Inchworm' Mak...tory '/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/Chrysalis' cd...
2148 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is widespre...ons in neuropeptide precursor sequences. Non-Redundant Pat...motifs. PRIDB -- Protein-RNA Interface DataBase Find information about protein-RNA complexes from the Protein Da...2008 days ago
