2952 days ago
3247 days ago
GraphMap - A highly sensitive and accurate mapper for long, error-prone reads
GraphMap is a novel mapper targeted at aligning long, error-prone third-generation sequencing data.It is designed to h...r profiles can vary widely across, or even within, sequencing runs. http://biorxiv.org/con...3237 days ago
Scaffolding of a bacterial genome using MinION nanopore sequencing
Second generation sequencing has revolutionized genomic studies. However, most genomes contain repeated DNA elements that are longer than the read lengths achievable with typical...3237 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single...mes that approach reference quality. https://www.genomeweb.com/sequencing-technology/researchers-combine-single-molecule-sequencing-mapping-technologies-analyze3233 days ago
Resolving the complexity of the human genome using single-molecule sequencing
The human genome is arguably the most complete mammalian reference assemb...r its completion. The results in this paper https://www.genomeweb.com/sequencing/team-uses-single-molecule-sequencing-close-gaps-chart-complexity-h...3233 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations Al...dataset were sequenced to at least 30x coverage using Illumina technology. The sequencing reads were mapped and genotyp...1105 days ago
Algorithms for DNA Sequencing (course offered each month)
"We will learn computational methods --...data structures -- for analyzing DNA sequencing data. We will learn a little about DNA, genomics, and how DNA sequencing is used. We will use Python t...and to analyze real genomes and DNA sequencing datasets." Source : htt...3219 days ago
Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,1...It uses the new NHMMER tool that comes with HMMER 3.1 for HMM searching in RNA:DNA st...2563 days ago
Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of life. This increasin...3031 days ago