3652 days ago
FSA: Fast Statistical Alignment
...Optimization and Control of Multiple Alignments." FSA brings the high accuracies previously available only for small-scale analyses of proteins or RNAs to large-scale problems such...2644 days ago
NCBI Prokaryotic Genome Annotation Pipeline
...notation is a multi-level process that includes prediction of protein-coding genes, as well as other functional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, con...2545 days ago
RNAcon: web-server for the prediction and classification of non-coding RNAs
...the prediction and classification of non-coding RNAs. It uses SVM-based model for the discrimination between coding and ncRNAs and RandomForest-based predic....P.S. (2014) Prediction and classification of ncRNAs using structural informationB...2483 days ago
P_RNA_scaffolder: a fast and accurate genome scaffolder using paired-end RNA-sequencing reads
...human contigs, the structures of both protein-coding genes and circular RNAs were almost completely recove...ose in a complete genome, especially for long proteins and long circular RNAs.2153 days ago
bpRNA: large-scale automated annotation and analysis of RNA secondary structure
bpRNA, a novel annotation tool capable of parsing RNA structures, including complex pseudoknot-containing RNAs, to yield an objective, precise, compact, unambiguous, easily-interpret...2173 days ago
960 days ago