Results for "Representation"
Blogs
List of gene ontology software and tools
...knowledge. Several excellent software tools for navigating the gene ontology have been developed. The GO provides core biological knowledge representation for modern biologists, whethe...3726 days ago
- ...a large array of evolutionary models, which makes it generic and applicable for nucleotide, protein and codon sequences; and (iv) a graphical representation of the results is provided, i...
2546 days ago
Bookmarks
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec...1162 days ago
- ...enomic information and public ontologies, making sense of these datasets demands integrative and easy-to-use software tools. Moreover, network representation of chromatin interaction maps...
2885 days ago
- +13 more Bookmarks
Top-level pages
- ...articularly important. Structure validation helps to correct obvious errors (e.g., in the covalent structure) and leads to a more standardized representation of structural data, e.g., by...
3963 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...troduction to R and Bioconductor, held in Seattle in Dec 2010 Genomic Regions Enrichment of Annotations Tool - A web service to test for over-representation of specific ontology categori...3795 days ago
- +8 more Top-level pages
Wire posts
News
High Density Sheep SNP Genotyping Chip released!!!
...spaced probes that target single nucleotide polymorphisms (SNPs). More than 18,000 of these markers were discovered through sequencing reduced representation libraries with the Illumina G...3913 days ago
- ...ng new features: - New tools to search for drugs and drug targets- Improved interface for 3D visualisation using Jmol/JSmol- An update to the representation of protein symmetry and stoic...
3911 days ago
- +2 more News
Opportunity posts
Post-doc position at LABGeM - Evry, France
...integrated approaches which combines bioinformatics methods based (i) on genomic and metabolic contexts, (ii) on an orignal metabolic network representation and (iii) on a structural cla...3084 days ago
One-year position for a bioinformatician / computational biologist in population genetics
...ostholder will also provide support in producing high-level graphic representations of these data and of result...xperience processing -omics data or skills in advanced graphical representation of data would be a plus....1201 days ago
ResearchLabs posts
J. Aires de Sousa Research Group
...1.automatic learning of chemical reactivity and metabolism, 2.simulation of NMR spectra, 3.modelling of properties of ionic liquids, and 4.representation of molecular chirality. Mo...3723 days ago
Video
- ...interpret genomic data. Botstein also has helped to create, with Michael Ashburner and Gerald Rubin, a bioinformatics initiative to unify the representation of gene and gene product attr...
3889 days ago
Bio-Scripts
- ...Produces RNA alignment metrics for a SAM or BAM file. CollectRrbsMetrics (Picard) Collects metrics from reduced representation bisulfite sequencing (Rrbs) d...
2091 days ago
Tags
Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-nearest neighbor for the alignment.With our new approach we have reduced computation cost forlocal alignment , while ...Tags: Nucl2Vec, Local, alignment, DNA, sequences, Distributed, Vector, Representation
1162 days ago
Comments
Comment on "Useful Links for Bioinformaticians"
Explain Bioinformatics to Your Grandmother! http://www.ploscompbiol.org/article/fetchObject.action?uri=info%3Adoi%2F10.1371%2Fjournal.pcbi.1003305&representation=PDF3848 days ago
