Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a collection of contiguous genes located on the same chromosome. These block regions have mostly bee...2611 days ago
2754 days ago
Ribbon: Visualizing complex genome alignments and structural variation:
Ribbon can be used for long reads, short reads, paired-end...on the right. Local installation: You can install Ribbon locally from Github by follow...ctions here: https://github.com/MariaNattestad/Ribbon2350 days ago
Awesome perl frameworks, libraries and software - PART 2
...scripts lestrrat/Data-Localize - Object Oriented Localization Tool For Perl kasei/attean - A Perl Semantic Web Framework kablamo/git-ribbon - A Perl script that hel...2495 days ago
Tags: Bioinformatics, Analysis, NGS, Visualization, Genome, Rearrangement, Ribbon
2754 days ago
Ribbon: Visualizing complex genome alignments and structural variation:
Ribbon can be used for long reads, short reads, paired-end reads, and assembly/genome alignments. Instructions for each data format are available by clicking on "instructions" in each tab on the right. Local installation: You can install Ribbon locally from Github by following the instructions ...Tags: Ribbon, Visualizing, complex, genome, alignments, structural variation
2350 days ago